Daucus carota (carrot): 108223987
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Entry
108223987 CDS
T05350
Name
(RefSeq) ATP-dependent DNA helicase DDM1
KO
K19001
ATP-dependent DNA helicase
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108223987
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108223987
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
DBINO
COG4_m
DUF5340
Motif
Other DBs
NCBI-GeneID:
108223987
NCBI-ProteinID:
XP_017253980
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All DBs
Position
5:13849357..13857779
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AA seq
756 aa
AA seq
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MGDKETPVKEEPVVDSPTSVLEEEDTCKDKVGVKLEEEEFLDAKNGDVSLISSEMAAVEK
KLKEENAAEEEEVKDVPELNDSQFSKLDELLTQTHLYTKFLLEKMDDITVNGVEEDSKDS
KPNKKGRGSKRKAASNYNTRKAKRAVAAMLTRSEETTASEDPSLTKEEIIEKEQAELVPL
LTGGQLKPYQIKGVKWMISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGMDGPYLVI
APLSTLSNWVNEISRFTPSINAIIYHGDAKAREQIRKESMPRSIGPKFPIVVTSYEVAMN
DAKKYLRHYSWKYIVVDEGHRLKNSKCKLLKELKHLPVENKLLLTGTPLQNNLAELWSLL
NFILPDIFSSHEEFESWFDLSGKCNNKAGKEELEETRQSQVVSKLHAILRPFLLRRMKED
VEQMLPRKKEIILYATMTEYQKNFQEHLVNRTLENHLLETVDTGRGFKGRLQNLMVQLRK
NCAHPDLLESAYDGSYFYPPVEQIVGQCGKFQLLDKLLRKLLARKHKVLIFSQWTKILDI
MHYYLEESGFEVCRIDGSVKLEERRKQIQEFNDLNSKYRIFILSTRAGGLGINLTSADTC
ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFNKLKLEHVVIAK
GQFMQEKTKADTADINEEDLLALLRDEENEEDKMIQTDINDEDLEKLLDRSDLMAGDTKM
ADGKPQYTASVLPLKGPGWEVVIPTSTGGMLNTVNT
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgggggataaggagacaccagtgaaggaggaaccggttgttgattctcctacttctgtg
cttgaagaagaggatacgtgtaaggacaaggttggggtaaaactggaggaagaagagttt
cttgatgcgaaaaatggcgatgtttctctaatttcgagtgagatggctgcggtggaaaaa
aagcttaaggaagagaatgcagctgaagaagaggaggtgaaggatgtaccggaactcaat
gactcccagttttctaaactggatgagcttttgacacagacccacctgtacacaaaattt
ttgctggagaaaatggatgacatcactgtgaatggagtggaagaagatagcaaagactct
aagccaaacaagaaaggccggggttctaaaagaaaggcagcttcaaactacaacactagg
aaggctaagagagctgtggcagctatgctcactagatcagaagaaaccactgcttctgaa
gacccgagcctcactaaggaagaaattattgaaaaggagcaggctgaacttgttcccttg
ttgactggtggtcaattgaagccatatcagataaaaggcgttaaatggatgatatcgtta
tggcaaaatggactcaatgggatcctggcagatcaaatggggcttggaaagacaattcaa
actattggttttcttgctcatctaaaggggaaggggatggatggaccgtacctagtcatt
gctcctctgtcaaccctttcaaattgggtgaatgagatatccaggttcacaccgtcaatt
aatgcaatcatctaccatggggatgcaaaagcaagggaacaaattaggaaggagagtatg
ccccggtcaatcggccccaaatttcccattgtagttacttcttatgaagttgcaatgaat
gatgcaaaaaagtatctgagacattatagttggaaatatattgtggtcgacgagggacac
aggctgaaaaattctaaatgcaaactactcaaagaattgaaacatttgcctgttgaaaat
aagttactgttaactgggacacctctgcagaacaacttggctgagctttggtcattgtta
aactttattcttcctgatatattctcatctcatgaagaattcgaatcatggtttgatctg
tctgggaaatgcaacaataaagctgggaaggaagaactggaggagacacgacagtcacaa
gtggtgagcaaactccatgctatattgcgtcctttcctccttcgaagaatgaaagaagat
gtcgaacaaatgcttcctcgaaagaaggagattattctgtatgccactatgacagagtat
caaaagaacttccaggagcatttagttaacaggacactggaaaatcacctgctagagaca
gttgacactggacgtggctttaaagggaggcttcaaaacttgatggttcaacttcgtaaa
aattgtgcccaccctgacctcttagagtcggcttatgatggttcctacttctacccacct
gtagagcagatagttggacagtgcggcaaatttcagttgctagacaaattgctgagaaag
ctattagctcgcaaacacaaagttctaatattttcccagtggactaagattttggatata
atgcattactatctagaagaaagcggttttgaagtttgtagaattgatggcagtgtaaag
ttggaagaaagaagaaaacagatccaggaattcaatgatttaaacagtaaatatagaata
tttattctaagcactagagctggtgggctggggatcaatcttacttcagctgacacttgt
attttgtatgacagtgactggaacccccaaatggatctacaggcaatggaccgctgtcat
agaattggccagacaaagcctgttcatgtttacaggcttgcaactgctcagtccgttgag
ggtaggattttaaaaagagcttttaataagttaaagcttgagcatgtggtgattgctaag
gggcagtttatgcaagaaaaaaccaaagctgatactgcagatattaatgaggaagatcta
ctagcccttcttcgcgatgaagaaaatgaagaagataagatgattcagacagacataaat
gatgaagatctagaaaagctattggaccgcagcgatcttatggctggtgatactaaaatg
gcagatggaaagcctcaatatactgcgagtgtgctacctttgaaaggacctggttgggaa
gtggttataccaacttcaactgggggtatgcttaacactgtgaacacatag
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