Daucus carota (carrot): 108226659
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Entry
108226659 CDS
T05350
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108226659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108226659
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108226659
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
108226659
NCBI-ProteinID:
XP_017257140
UniProt:
A0A161ZYK1
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Position
6:complement(36741358..36744117)
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AA seq
365 aa
AA seq
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MSVHENSMHTLLPEFFQDSDNQFLESNFSVASPEDIFSILEALDEVSTSNINSLPPLSHE
SRLPPQCFDNQQPGTARTNLVPQNPSFSFDAVPSEDQIGTELEAVSTSHKSKKQKVAVTA
EEDANIDGQQKVSHITVERNRRKQMNDNLSVLRSLMPCFYVKRGDQASIVGGVVDYITEL
QQVLQSLEAKKQRKVYSEVLSPRLVSSPRNLPISPRKPPISPRLIPSLPISPRTPTSPYK
HHGNLLQSAAYNLSPTIMSPISSPSVNHHNAMAAANELVANSKSGVADVEVKFSGPNLLL
KTVSARIPGQTLKIITALEDLSLEILNVSLSTAEETMINSFTIKIGIECTLSAEDLALHV
QQTFC
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcatgagaacagcatgcatactttgttacctgaattcttccaagactccgac
aatcaattcctcgaatccaatttctccgtcgcctcgccggaggatattttcagtattctc
gaggccttagatgaagtgtcgacgtccaatatcaactcattacccccgctgtctcatgaa
tctcgtttgcccccgcaatgttttgataatcagcagccggggactgctcgtacaaactta
gtcccacaaaatccatcattttctttcgatgctgttccttcagaagatcaaatcgggacg
gagctagaggcggttagtacttcacacaagtccaagaaacagaaggtagcggtgacagca
gaggaagatgcgaatatcgatgggcagcagaaggtatcccacattactgtggaacgcaac
cgcaggaagcagatgaatgacaatctgtccgtcttgcgttcgcttatgccttgcttctat
gtcaaaagaggtgatcaagcatccatagtaggaggtgtagttgactacattactgagttg
cagcaagttctacaatccctagaggcaaagaagcaaaggaaggtttacagtgaagtccta
agtccaaggctggtctcaagtcctagaaatttaccaatcagcccaaggaaacccccaata
agtcctagactaataccaagcctacccataagcccaagaacaccaactagcccttacaag
caccatggtaacttgctgcagtcagctgcttataacttatctccgaccatcatgtctcct
atttcttcgccctctgtcaatcaccacaatgccatggctgcagctaacgagctggttgcc
aattcaaagtccggggttgcggatgtggaagtgaaattctcagggcctaatctgctgcta
aagactgtatctgctagaatacctggccaaaccctcaagatcatcacagccctcgaagat
ctctcactcgagatcctcaatgtgagcctcagtactgctgaggaaaccatgatcaattct
ttcaccatcaagattggaatcgaatgtacactaagcgcagaagacctggcgctccatgtc
cagcaaacattttgctga
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