Daucus carota (carrot): 108228141
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Entry
108228141 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108228141 isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108228141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108228141
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
108228141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_MROH2B_C
TOR1L1_N
TPR_DNAAF5
EncFtn-like
A9CJY8-like_N
Motif
Other DBs
NCBI-GeneID:
108228141
NCBI-ProteinID:
XP_017259122
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All DBs
Position
6:complement(32931057..32942751)
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AA seq
888 aa
AA seq
DB search
MGKPKSSSKKPPKRGIDFKKIKRKIGRKLPPPKNTTNTEIKSKAIILPEQSVASDKAGLA
VSKKGLTLKELMQQTSHHNAKVRKDALIGIKDILTKNPDELRLHKLALIEKLRERISDDD
KLVRETLYQIFKGVIFPGCKEDGQGPFISLMMVYIFSAMTNLAIDIRLMAFKFLDLILQN
CPTSFSSYAEKILQNYEDILRQNQFYLQDKAKLKNALAGITYCLSLLPHNRRGDTLATDS
RPGDSVLHSYEPDVPKESAGLSVITKKLNGILPILVGCFHDFVPLVHTSPQLDAQSFDCM
LSVLQSIDLIVQFFAYGIDKGQHELQISLSFYTHRNVSHHGQDNIMVMLKKLWDVFPLYP
AHQLSEKEDNRYFILNIIISEIFLSLIDWIYPSSDLLEKFLMFIENALSEKICGSLQLGK
VFHDKHSVSLVAYIPKLLKQVSGSWRSRILQGFTNVFKSCKPESSLKMVCISAIEEFLDP
QEKGWLYLETTDPEILAYHITWLRELPSLLIHLGDKHQLSSKAVLLLQLHLGQCALINPS
LSQEYNNIQYTLKDFYSKGIADSTGGYGPFVSLTRDIQELSVCCLYYFPFLDSPIIQSVT
SCCLCHNLESVILFRIIEILHSSYKAGRIQIANHISFFITLLARYKVYPEKSADLVENDG
KSNFGTFKSITNVVCSFLLQLGDEHIVFQMLEKIIIDQLLLNPPLDNICALLRVLVKLDS
EPTRLSEQSMINLGSFLPGYLTDIVSCIPEDKTQSATMVSRKRTHYYLLPCMFIFHRSHT
LLKLVLKKMGSLVNEESSSGSNQLWTQYLTGYSSRIDAIVSVLLLIFADIKIQQKLLLCK
EEIQQISEKILQLQLSEVINMTMEERYKIRCSYDRLKSCSSKLLAGIR
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacccaagtcttcttccaagaagccgcccaagcgtggtatcgatttcaagaaa
attaaacgaaaaattggccgaaagctaccgccgccgaagaatactaccaacactgaaatt
aaatccaaagctattatacttcccgaacaaagtgtagcatcagataaggcgggtttagct
gtcagcaagaaagggttgacactcaaagagcttatgcaacaaacttctcaccacaatgct
aaagttcgcaaagatgcgttgattggtataaaggacatactcaccaaaaatccagatgag
ctgaggttgcataaacttgctcttatagagaaactgcgtgaacgcatcagtgatgatgat
aaactggttcgtgaaacactatatcaaatttttaagggggttatattccctgggtgcaaa
gaggatggtcaagggcctttcatatctctgatgatggtttatatctttagtgctatgaca
aatttggcaattgatattaggttgatggctttcaaatttcttgatcttattctccaaaac
tgcccaacttcattttcctcgtatgctgaaaagattcttcagaactatgaagatatatta
agacagaaccagttctatctacaagacaaggccaagctcaagaatgctcttgcggggata
acatactgcttatcgcttttaccccataatcgtagaggagacactttagcaactgatagc
aggcctggggatagtgttttgcattcttatgaacctgacgtgcctaaagaatctgctggg
ctctctgtcatcacaaagaaacttaatggaattttgcctattctggtcggatgtttccac
gattttgtacctttggtccatacttcaccacaactagatgcacaatcatttgactgtatg
ctatccgtacttcaaagtatagatctgatagtacagttttttgcttatgggatagacaag
ggtcaacatgagttacaaatttctctatcgttttatacacatcggaatgtatctcatcat
ggtcaagataatattatggtaatgctaaagaaattatgggatgtctttcccctctatcca
gcacatcagctttcagagaaggaagataatagatactttattcttaatatcataatttct
gaaatctttttgtcattgattgactggatctacccttcctccgatttgctggaaaagttt
cttatgtttatcgagaatgcattatcagaaaagatatgtgggagcttgcaattaggcaag
gtttttcatgataagcattctgtatcacttgttgcatacataccaaagcttttgaaacaa
gtttctggtagctggagatcacgtattcttcagggtttcactaatgttttcaagagttgt
aagccagaatcttcattaaaaatggtttgcatctctgcgatagaagaatttttagaccca
caggaaaaaggctggttgtacctagagacaactgatcctgaaattttggcttatcacata
acttggctaagggagcttccttcattgctgatccatttaggtgataaacaccaattatcc
tccaaggccgtgttacttcttcaacttcacctgggacaatgtgctttgataaatccttct
ctctcgcaggaatacaataacattcagtatacactgaaagatttttacagcaaaggcata
gctgattcaactggaggctatggtccttttgtaagtctcaccagagatattcaagaactc
tctgtgtgttgcctttattatttcccttttttggattcgcccattattcagtcagtaact
tcctgttgcctatgtcataatctagagtcagttatattgtttcggatcatagagattttg
cattcatcctacaaagctggacgcatacaaattgctaatcacattagcttttttataact
ctactcgctcgttacaaagtttatccagagaagagtgctgatctagtggagaatgatgga
aaatcaaattttgggacttttaagtcaattactaacgttgtctgctctttcctgttgcaa
cttggtgacgagcatattgtgtttcaaatgttggagaagataattattgatcaactttta
ctcaatccacctttagacaacatttgtgcattgctcagagtgcttgttaaactagactca
gaaccaacgagactttctgaacagagtatgatcaatcttggtagttttcttccaggatac
ctaactgatattgtatcgtgcattccagaagataaaactcagtctgccaccatggtttcg
aggaagagaactcattattatctcctgccttgcatgtttatcttccatcggagtcacaca
cttttaaaactcgtgttgaagaaaatgggatcattagtaaatgaagagagttcgtcaggt
tcaaatcagctgtggacacagtatttaactggctattcaagtagaatagatgccattgtt
tccgtcctactactaatatttgcagatatcaaaattcaacaaaaacttttgttgtgtaag
gaagagattcagcaaatatcagagaagattcttcaactacagttatcagaggttatcaac
atgactatggaagagaggtacaaaataagatgttcatatgatcgattaaagagttgcagc
agtaaattattagcgggaataagatga
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