Dendrobium catenatum: 110095389
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Entry
110095389 CDS
T05027
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110095389
Enzymes [BR:
dct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110095389
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110095389
NCBI-ProteinID:
XP_020676576
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MECVQFRPCFLILFSALILTAPVRSHIGDFDDFWQKRAEASRAKVRESYNPDPHGATNDF
NRDVFMALEKNNTHRSLISRKRSPTDPCWATNPIDRCWRCQSNWASYRKRLAFCAKGFGR
NAIGGVKGRFYVVTDASDNDLVNPKPGTLRHAVIQAEPLWIVFARDMVIRLNEELIVNSY
KTIDGRGANIHIAYGAQITIQFVHHIIIHNLHIHHLSPGNGGMIRDSPSHYGIRTRSDGD
GISIYGASNIWIDHISMSNCADGLIDAIMGSTAITISNCHMTNHDDVMLFGASDSFAGDA
LMQVTVAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWQMYAVGGSQHPTVISQGNRYIAP
PDINAKQVTKRDYAPEAIWSQWTWKSQGDLMINGAFFVESGQRFISRYTRHDMMRAKPGT
FVTRLTRYSGTLNCKIGLPC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcgtacagttcaggccttgcttcctcatcctcttctcggccctcatcctcacc
gcgcccgttcgctcgcacattggtgatttcgacgatttctggcagaagcgggctgaggct
tcccgcgctaaggtccgtgagtcttataaccccgacccacatggggccaccaacgacttc
aatagagatgtgttcatggcattggagaagaacaatacacacagatccctaatatcaagg
aagcgaagtcctacagatccatgctgggccacaaaccccattgatcgatgctggcgctgc
caatctaattgggccagttaccgcaagagattggccttttgtgctaagggctttggccgc
aatgccataggtggtgtcaaaggtcgcttctatgtagtgacagatgcgtccgacaatgat
cttgtcaaccccaagccggggacacttcgccatgccgttattcaggctgagccattgtgg
atagtgttcgcccgtgacatggtgatccgcctcaacgaggagctaatagtaaatagctac
aaaaccatcgacggtcgtggcgccaacatccacatcgcctatggcgcccaaatcaccatc
caattcgtccaccacatcatcatccacaacctccacatccaccatctcagccctggcaac
ggcggcatgatccgcgactccccttcacattatggcattcgcactcgcagcgatggtgat
ggcatctccatctacggtgcctccaacatatggattgaccacatatccatgtccaactgt
gctgatggcctaatagacgccatcatgggatccaccgccatcaccatttccaattgtcac
atgacaaatcatgacgatgtaatgctctttggcgccagcgactccttcgccggggatgcc
cttatgcaggtaacggttgccttcaaccacttcgggcgtggactcgtgcaacggatgccg
cgttgccggtggggctttgtccatgtcgtcaacaatgactacacacattggcaaatgtac
gccgtcgggggaagccagcatcccactgttatcagtcaggggaatcgatacattgctccg
ccggatatcaacgccaagcaggtgacgaaaagggattatgcaccggaggctatctggagc
cagtggacgtggaagtcgcagggtgatctgatgataaatggagcgttcttcgttgagtca
gggcaacgatttattagcagatacacgaggcatgatatgatgagggccaagccagggacg
ttcgtaaccaggctcacacgctactctgggacccttaactgcaagatcggattgccttgc
taa
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