KEGG   Dendrobium catenatum: 110099820
Entry
110099820         CDS       T05027                                 
Name
(RefSeq) DNA mismatch repair protein MSH3 isoform X1
  KO
K08736  DNA mismatch repair protein MSH3
Organism
dct  Dendrobium catenatum
Pathway
dct03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110099820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dct03400]
    110099820
DNA repair and recombination proteins [BR:dct03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110099820
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II
Other DBs
NCBI-GeneID: 110099820
NCBI-ProteinID: XP_020682769
LinkDB
Position
Unknown
AA seq 1099 aa
MGKPKQQVLSRFFAPKSTSPLASMEQKSPPPPSPPRSKPSPRIAAIVSFSPSATSSKRSH
PHSQNPSSCAKKPKPSLHEKLVSKLLDSPASSSVTLPKPSAENPKYTPLEQQVLELKSQH
PDVLLMVEVGYRYRFFGEDAENAARVLGIIAHADHNFLTASVPTFRLNFHVRRLVAAGYK
VGVVKQTETAAIKAHGSNRLGPFSRGLSALYTRSTIEAAEDMGSGKEDGLVGSDGNYLLC
VAEKEAVAGYKGSDLEGCFDVKIGIVGVEISTGEVIHGEFNDNVMRSGLEAVVLSLSPAE
ILLGDPLSASTEKLLLAYAGPASNVRVERSSRDCLNDGGALAEVMSLYEEVAGDTPNVKN
VETNLDIRRGRDDSSGIEGILAMPELSIQALALSLRYLKKFGLERILIMGASFRPLSSNV
EMTLSANTLHQLEVLRNSCDGSIEGSLLHAMDHTCTSFGSRLLKHWVTHPLCERNSIIAR
LDAVTEIADSMGSCRGLKEETSCNETSSILSEVLKMLGKSPDVQRGITRIFHRTATAAEF
VGAIQAILFSGKQLQKLYAEDDENNVTRIVKSALLRRLILTASSTTLIARAAQLLSSLNK
DAANQGDMLNLFNTSCGQFPEVASSQIAVQMTKEKLDSLIIQYRKQLGMRNLDFTSVSGV
THLIELSSDTKVPSSWVKVNSTKKSVRYHTPEVLATLDKLVLAKEEFAVTCRKTWAIFLT
EFGTYYAQFQASVQALAGLDCLHSLAILSRNQKYVRPTFGSNDEPGQIHISSGRHPVVYS
QVLGSVLGEHFVPNDTCLCADGEYCQVVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASS
ATLHVLDGIYTRMGASDSIQHGSSTFFEELAETSYILEHSTSRSLVIIDELGRGTSTHDG
VAIAHATLHYLLQQKKCMILFVTHYPQILDIQSEFEGSVGAYRVSYLTAQKPLNLMESKP
EFDNGEVDEQEVTFLYKVVHGASDKSFGLNVARLAQLPDLCIRRAAFIAAKLEADMGSQL
RNLATMSGNKTIEKYEASDNCSISPKYAYKDDEPFEELAKACHSIFFCVKSALQSADTDR
ILSCWKGARELAQIATKGG
NT seq 3300 nt   +upstreamnt  +downstreamnt
atggggaaacctaagcagcaggtcctctcccgcttctttgccccaaagtcgacgtctcct
ctggcgtcgatggaacaaaaatcaccaccgccaccatcccctccccgttccaaaccctca
ccgaggatcgccgctatcgtctctttttccccgtccgcaacttcctctaagcgttcccat
cctcattcgcaaaacccgtcctcatgtgccaaaaaaccgaaaccctcgctccacgagaag
ttggtgtcgaagctcctcgattctcccgcttcctcctcggttactctcccaaaaccctcg
gctgaaaaccccaaatacactccactcgagcagcaggtcctcgagctaaaatctcagcat
ccagacgtactcctcatggtagaggtcggctaccgctaccgtttctttggcgaggacgcc
gagaacgctgcgcgagtccttggcatcatcgctcacgcggaccacaattttctcactgcc
agtgtgcccacattccggctaaattttcatgtccggcgccttgttgccgccgggtacaag
gtgggtgtagttaagcagacggaaacggcggcgattaaggcacatgggtcgaaccggcta
ggaccgttttcaaggggcttgtcggcgttgtatacgaggtcgacgattgaagcagcggag
gatatgggaagcggaaaggaagacgggctggtgggttcggacgggaattaccttctctgt
gttgcagagaaggaagctgtggctggatataaaggttctgatctggaaggttgttttgac
gtgaagattgggatagttggagtggagatatcgactggggaggtcattcatggtgagttc
aatgacaatgttatgagatcggggctcgaagccgtggttttgagcttatctccagcagaa
atccttctaggagatcctctttctgcatctacggagaagctgctgttggcctatgctgga
cctgcatctaatgttcgagttgaacgaagttcccgagactgtttaaatgatgggggtgca
cttgctgaagtgatgtccttatatgaagaggtggctggggataccccaaatgtgaaaaat
gttgaaacaaatttggacatcaggagagggagagacgattccagtgggattgagggaatt
ttagccatgccagaactatctatccaagcattggcattatccttgcgataccttaaaaag
tttggtttggaaaggattttaatcatgggtgcttctttccggcctctctctagtaatgtt
gagatgacgctatcggcaaatacacttcaccagttggaggtcttgcggaacagctgcgat
ggttctattgaaggttcattgctacatgctatggatcacacttgtacttcatttggttca
agacttctgaagcactgggttactcatccattatgtgaaagaaactccataattgcacgt
cttgatgcagttactgaaatcgcagattcaatggggtcttgtagaggtttaaaagaagaa
acttcatgcaatgaaactagttctatactttcagaagttttaaagatgttggggaagtca
ccagatgtacaacgtgggataactagaatttttcacagaactgctacagcagctgagttc
gttggggccatccaagctatcctcttctctggcaagcaattacagaagctttatgctgaa
gatgacgaaaataatgttactagaattgtgaaatctgctcttctgagaaggctaattttg
accgcatcatcaactactttaattgctcgagctgcacagcttctctcctctcttaacaag
gatgctgctaatcagggtgatatgctcaatttgttcaatacttcttgtggtcaattccca
gaggttgctagcagccaaatagctgttcaaatgaccaaagaaaagcttgattcattaatc
attcagtaccgaaaacagcttggaatgcggaatttagacttcaccagtgtctctggagtc
acccatttaattgaattatcttctgataccaaggttccttccagttgggttaaggtcaat
agtactaagaagtcggtgagatatcataccccagaggtcttggcaacattggataagttg
gtgcttgcgaaggaagaatttgctgttacatgcaggaaaacatgggctatttttttgaca
gagtttggtacatactatgctcaatttcaggcttcagttcaagctctggctggtttggat
tgtttgcattcactagccattctctcaaggaatcagaaatatgtgcgaccaacatttggg
agtaatgatgaacctggtcaaatacatatcagttcaggtcgccacccagtggtgtactcg
caggttctggggtccgtcttaggagaacattttgttccaaatgatacgtgcctttgtgca
gatggtgaatattgccaggtagtcaccggaccaaatatgggtggaaagagttgctacata
cgccaggttgcccttatagcaataatggctcaggttggttcctttgtaccagcgtcatca
gcaactttgcatgtgctggacgggatatacactcgcatgggagcttctgatagcatccag
catggatcaagtaccttctttgaagaattggctgagacttcttatattctagaacattcc
acatcacgctctctggtcattatcgatgaactcggccgtggaacaagcacccatgatggt
gttgcgattgctcatgcaacattgcattatcttcttcaacagaagaaatgtatgattctt
tttgtcacccactacccccaaattctggatatacagagtgaatttgaaggatcagttggt
gcatatcgcgtttcttatctaaccgcacagaaacctttgaacttgatggaatctaaacca
gaatttgataatggagaagtggacgaacaagaagtgacctttctatataaggttgttcat
ggtgcatcagacaagagctttggtcttaatgttgctcgcctcgcacagctgcccgatttg
tgcattagaagagcagctttcatcgcggcaaaactagaagcagacatgggttcacagcta
agaaatctagcaacaatgtctggtaataaaaccatagagaaatatgaagcttctgacaat
tgttccatttcacctaaatatgcgtataaagatgatgagccctttgaagaactggcaaaa
gcatgccacagtatatttttctgtgtaaaatcagccctacaaagtgctgacacagataga
attttaagctgttggaagggcgctcgagaacttgcacagatagcgacaaagggagggtga

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