Dendrobium catenatum: 110103825
Help
Entry
110103825 CDS
T05027
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110103825
09123 Folding, sorting and degradation
03018 RNA degradation
110103825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110103825
03041 Spliceosome [BR:
dct03041
]
110103825
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110103825
mRNA degradation factors
5'-3' decay
Lsm complex
110103825
Spliceosome [BR:
dct03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110103825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110103825
NCBI-ProteinID:
XP_020688342
LinkDB
All DBs
Position
Unknown
AA seq
148 aa
AA seq
DB search
MLPLSLLKTALGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQDETNKSRSDRKPPGVGRGRGRGREDGSSTHSKGIGRGSND
NKVSGSGRGRGGPGGRGSGRGGGRGRGA
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctctctcttttgaagacggcgctggggcatcctatgttagtggagttgaag
aatggggaaacttataatgggcatctggtgaattgtgatacttggatgaacattcacctc
agagaggtcatttgcacctcaaaggatggagacaggttttggaggatgcctgagtgttac
atacgtgggaacacaatcaagtaccttagggttcctgatgaggttattgacaaggttcaa
gatgaaactaacaaaagccgctctgacaggaaaccccctggggtaggccggggaagagga
agaggtagagaggatggcagcagtacacattctaaaggaatcggaagaggttctaatgac
aacaaagtctcaggtagtggacgcggcaggggagggcctggtggtagaggcagtggcaga
ggtggagggcgtggacgtggcgcatga
DBGET
integrated database retrieval system
