Dendrobium catenatum: 110105117
Help
Entry
110105117 CDS
T05027
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110105117
Enzymes [BR:
dct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110105117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110105117
NCBI-ProteinID:
XP_020690149
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MLRLRSSLLIQFVHILLLPFAHPLPNPNSSHPYPESVAGGVLRHIELSRRRALSSQLQCL
TGNPIDDCWRCSTTDWRSDRQRLADCGIGFGRDALGGKGGRIYVVTDSSDHDPVNPTPGT
LRHAAIQDDPLWIVFSADMNIRLAEELLVNSFKTLDGRGADVHISGGACITLQYVSNVII
HNLHIHDCVPAGNANVRSSPTHTGFRSRSDGDGISIFGARKIWIDHCSLSNCADGLIDAI
MGSTGITISNNYFSRHNEVMLLGHSDNYSPDLGMQVTIAFNRFGEKLIQRMPRCRLGYFH
IVNNDFTEWEMYAIGGSGNPTVNSQGNRYIAPPDPNAKEVTKRVDSDDKDWSGWNWRSEG
DIMVNGAFFIPSGDGLETIYSKASSVSPKPVGLIDQLTLNAGVLGGSRDNGGQSGGNGGA
NYGGGGGDGGGGDGGGGGVAMGGRGSGLTGYLAMAFGSGVAPPISQPGPFLYLPIIFLFF
LQL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcctccggagcagtctacttatccagttcgtccacattcttctcctcccattc
gcccatcccctccccaaccccaactcctcccacccctaccctgaatcagtcgccggcggc
gtccttcgccacatcgagctctcccgccggcgcgccctctccagccaactgcaatgcctc
actggaaaccccattgacgactgctggcggtgctctaccaccgactggcgatccgatcgc
cagcgccttgcagactgcggcattggctttggccgcgacgcgcttggcgggaagggaggc
cggatctacgtcgtcaccgactcgtccgaccacgacccagtaaaccccacccctggtacg
ctccgccacgcagccatccaggacgaccccctttggatcgtcttctccgccgacatgaac
atccgtctcgccgaagagctcctcgttaacagcttcaagactctcgatggccgcggcgct
gacgtccacatctccggcggcgcctgcatcaccctccaatacgtctccaacgtcatcatc
cacaacctccacatccacgactgcgtccccgccggcaacgccaacgttcgctcctctccg
acccacaccggcttccgcagccgatccgacggcgacggcatctccatcttcggcgctcgc
aagatctggatcgaccattgctccctctccaactgcgcggacggccttatcgacgccatc
atgggatccaccggcatcaccatttcgaacaactacttctcccgacacaacgaggtgatg
ctgctcggccacagcgacaactactcgccggatttaggcatgcaggtcaccatcgccttc
aaccgcttcggggagaagctcatccagcgaatgccgcgatgtcgcctcggctacttccat
atcgttaacaacgatttcacggagtgggaaatgtacgccatcggcggaagcggtaatccg
actgtgaatagtcaggggaaccgctacattgctccgcctgatccgaacgccaaggaggtg
accaagagagtggacagtgatgacaaggattggagcgggtggaattggagatcagagggg
gatatcatggttaacggggctttctttattccgtcgggagatggcttggagacgatctat
tcgaaggcttccagcgtttcgccgaagcccgtcgggctcatcgaccagctcactctcaac
gccggcgttctcggcggttcgagggataatggagggcagagcggaggtaatggcggagct
aattacggtggcggcggcggcgatggtggtggtggtgatgggggcggcggaggtgtagca
atgggcggccgtggcagtgggcttacgggatatctggccatggcgtttgggagtggcgtg
gcaccacctatttctcaacctgggccgtttttgtacttgccaattatttttctcttcttt
ctccaattgtaa
DBGET
integrated database retrieval system