Dendrobium catenatum: 110105151
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Entry
110105151 CDS
T05027
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110105151
Enzymes [BR:
dct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110105151
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110105151
NCBI-ProteinID:
XP_028551809
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MAAKIIFFLLPPTFFLISAIATSSTPPLSSTAAVPNPELIVEEHRKFHYNGNSLIDSNRS
INASRRQLGYLSCSTGNPIDDCWRCDPNWETNRQGLADCAIGFGRNALGGKGGATYVVTD
SGDDDPVTPKPGTPRYGVIQDKPLWIVFERDMVIQLKEELMMNSYKTLDGRGVSVHIAGG
PCITVQYVSHIIIHGLNIHDCKQGGNAYVRDSPGHYGWRTLSDGDGVSIFGGSHVWVDHC
SLSNCRDGLVDAIRGSTAITISNNYMTHHDKVMLLGHSDEMVEDKNMQVTIGFNHFGEGL
VQRMPRCRLGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPDNRFSKEVTKREDAP
TSQWKNWNWRSEGDLMLNGAFFTTSGAGASSSYAKASSLGARSSSLVGVITSSAGALICK
KGRSC
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaaataatattcttcctcctcccgcccaccttcttcctcatttctgccatt
gcaacctctagcactcctccattgtcttctacagcggcagtcccaaaccccgagctgatc
gttgaggaacaccgtaaatttcattacaatggtaattcccttatcgactctaacaggagc
atcaacgcctctcgtcgacagctaggctatctctcctgcagcaccggcaacccaattgat
gattgttggcgctgtgaccccaactgggaaaccaaccgccaagggcttgccgactgcgca
ataggcttcggtcgcaatgccctcggtggcaaaggcggcgccacctatgtcgtaactgat
agcggcgatgacgatcccgtgacccccaaacccggaaccccccgctacggcgtcatccaa
gacaagcccctctggatcgtgtttgaacgggacatggttatccagctcaaggaagaactc
atgatgaactcctacaaaaccctcgacggccgcggcgtcagcgtccacattgccggcggt
ccctgcatcaccgtccaatatgtaagccatattatcattcatggcctaaacatacacgat
tgtaagcagggggggaatgcttatgtgcgagactcccctggacattatggatggcgaaca
ctgtcggatggcgacggcgtctccatatttggcggaagccatgtttgggttgatcattgt
tcgctgtcaaattgccgagatgggcttgtcgacgccattcgtgggtcgacggcaatcacc
atttcgaacaattatatgactcatcatgataaggtgatgctgctcggacatagcgatgag
atggtggaggataagaacatgcaggttactattggatttaaccattttggtgaaggattg
gttcagaggatgccaaggtgcaggcttggatattttcatgtggtgaacaatgactatacg
cactgggaaatgtacgcgatcggaggaagcgcggcgccgacgattaacagccagggaaat
aggttcctcgcccctgacaaccgtttcagcaaggaggtgacgaagcgagaggacgcacca
acaagccagtggaagaactggaactggaggtcagaaggtgatttaatgttgaatggcgcc
ttcttcaccacgtcgggcgcgggagcctcgtcgagctatgccaaggcgtcgagtttggga
gctagatcttcctctcttgttggggtcataaccagttcggccggtgctctgatctgcaag
aagggccggagctgctaa
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