Dendrobium catenatum: 110110673
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Entry
110110673 CDS
T05027
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
dct
Dendrobium catenatum
Pathway
dct03030
DNA replication
dct03410
Base excision repair
dct03420
Nucleotide excision repair
dct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110110673
03410 Base excision repair
110110673
03420 Nucleotide excision repair
110110673
03430 Mismatch repair
110110673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dct03032
]
110110673
03036 Chromosome and associated proteins [BR:
dct03036
]
110110673
03400 DNA repair and recombination proteins [BR:
dct03400
]
110110673
DNA replication proteins [BR:
dct03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110110673
DNA Replication Termination Factors
ELG1-RFC complex
110110673
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110110673
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110110673
Check point factors
HRAD17(Rad24)-RFC complex
110110673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
AAA_22
RuvB_N
Mg_chelatase
Rad17
AAA_16
AAA_11
ResIII
AAA_5
AAA_24
AAA_2
AAA_14
DNA_pol3_delta
SLFN-g3_helicase
nSTAND3
PhoH
AAA_19
AAA_7
AAA_28
AAA_18
AAA_assoc_2
MCM
RNA_helicase
AAA_25
ATPase_2
AAA_30
bpMoxR
Parvo_NS1
DUF815
IstB_IS21
TIP49
NB-ARC
Motif
Other DBs
NCBI-GeneID:
110110673
NCBI-ProteinID:
XP_020697924
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
SQPWXEKYRPKQVKDVTHQEEVIRILANTLETANCPHMLFYGPPGTGKTTTALAIAHQLF
GPELYKSRVLELNASDDHGINVVRTKIKDFAAVAIGSGNRQGGYVCPPYKIIILDEADSM
TEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEDVMSSRIMHIC
NEEGLSLDYEALTTLSSICEGDLHRAITYLQSAARLYGFSISSKELISISGLIPQGTVQA
LFAACKIGEFDTANKEVSNVISEGCPVSQMLSRLFELIFSSDDISNVQKARICKRLAKAD
KFLVDGADEYLQLMDVASHLMRTLFDMPQEIQFD
NT seq
1006 nt
NT seq
+upstream
nt +downstream
nt
ttctcaaccatggnntgaaaaataccggccgaagcaagtgaaggacgtaacccaccagga
agaggttattcgcattcttgccaacaccctcgagaccgccaactgtcctcatatgctctt
ctatggacctcctgggacgggtaaaaccacaacggctctagccattgcacaccagctatt
tggacctgaactgtacaaatcacgagttcttgaactgaatgcaagtgatgatcatgggat
caatgttgtgcggacaaaaataaaggattttgctgctgttgccattggttctggtaatcg
ccaaggtggctatgtttgtccaccttataaaatcattatcttagatgaagcagattcaat
gactgaagatgctcagaatgctttgagacgtactatggagacttattcaaaagtcacaag
gtttttcttcatttgtaattacattagcaggataatcgaaccactagcttcaagatgtgc
aaaattcagattcaaacctttaaccgaagatgtcatgagtagtcgtatcatgcacatatg
taatgaggaaggcctcagtctagattatgaggctcttacaactttaagctccatttgtga
aggagatcttcatcgtgccataacatatttgcagagtgctgctcgcttgtatgggttttc
aatttcatccaaggaattaatcagcatttctgggctgatacctcagggtactgttcaggc
cctatttgcagcttgtaagattggggagttcgacacagcaaacaaggaagttagtaatgt
gatttcagagggatgtccagtatcacaaatgttatctcggttgtttgaactgatttttag
ctcagatgacatatctaatgtacagaaggcacgaatatgcaaaaggctggctaaagcaga
taagtttctagttgatggggctgatgagtacctgcagctgatggatgtagccagtcattt
aatgcgtaccctttttgacatgccccaggagatacagtttgattag
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