KEGG   Dendrobium catenatum: 110110673
Entry
110110673         CDS       T05027                                 
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 2-like
  KO
K10755  replication factor C subunit 2/4
Organism
dct  Dendrobium catenatum
Pathway
dct03030  DNA replication
dct03410  Base excision repair
dct03420  Nucleotide excision repair
dct03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110110673
   03410 Base excision repair
    110110673
   03420 Nucleotide excision repair
    110110673
   03430 Mismatch repair
    110110673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dct03032]
    110110673
   03036 Chromosome and associated proteins [BR:dct03036]
    110110673
   03400 DNA repair and recombination proteins [BR:dct03400]
    110110673
DNA replication proteins [BR:dct03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110110673
  DNA Replication Termination Factors
   ELG1-RFC complex
    110110673
Chromosome and associated proteins [BR:dct03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110110673
DNA repair and recombination proteins [BR:dct03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110110673
  Check point factors
   HRAD17(Rad24)-RFC complex
    110110673
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 AAA_22 RuvB_N Mg_chelatase Rad17 AAA_16 AAA_11 ResIII AAA_5 AAA_24 AAA_2 AAA_14 DNA_pol3_delta SLFN-g3_helicase nSTAND3 PhoH AAA_19 AAA_7 AAA_28 AAA_18 AAA_assoc_2 MCM RNA_helicase AAA_25 ATPase_2 AAA_30 bpMoxR Parvo_NS1 DUF815 IstB_IS21 TIP49 NB-ARC
Other DBs
NCBI-GeneID: 110110673
NCBI-ProteinID: XP_020697924
LinkDB
Position
Unknown
AA seq 334 aa
SQPWXEKYRPKQVKDVTHQEEVIRILANTLETANCPHMLFYGPPGTGKTTTALAIAHQLF
GPELYKSRVLELNASDDHGINVVRTKIKDFAAVAIGSGNRQGGYVCPPYKIIILDEADSM
TEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEDVMSSRIMHIC
NEEGLSLDYEALTTLSSICEGDLHRAITYLQSAARLYGFSISSKELISISGLIPQGTVQA
LFAACKIGEFDTANKEVSNVISEGCPVSQMLSRLFELIFSSDDISNVQKARICKRLAKAD
KFLVDGADEYLQLMDVASHLMRTLFDMPQEIQFD
NT seq 1006 nt   +upstreamnt  +downstreamnt
ttctcaaccatggnntgaaaaataccggccgaagcaagtgaaggacgtaacccaccagga
agaggttattcgcattcttgccaacaccctcgagaccgccaactgtcctcatatgctctt
ctatggacctcctgggacgggtaaaaccacaacggctctagccattgcacaccagctatt
tggacctgaactgtacaaatcacgagttcttgaactgaatgcaagtgatgatcatgggat
caatgttgtgcggacaaaaataaaggattttgctgctgttgccattggttctggtaatcg
ccaaggtggctatgtttgtccaccttataaaatcattatcttagatgaagcagattcaat
gactgaagatgctcagaatgctttgagacgtactatggagacttattcaaaagtcacaag
gtttttcttcatttgtaattacattagcaggataatcgaaccactagcttcaagatgtgc
aaaattcagattcaaacctttaaccgaagatgtcatgagtagtcgtatcatgcacatatg
taatgaggaaggcctcagtctagattatgaggctcttacaactttaagctccatttgtga
aggagatcttcatcgtgccataacatatttgcagagtgctgctcgcttgtatgggttttc
aatttcatccaaggaattaatcagcatttctgggctgatacctcagggtactgttcaggc
cctatttgcagcttgtaagattggggagttcgacacagcaaacaaggaagttagtaatgt
gatttcagagggatgtccagtatcacaaatgttatctcggttgtttgaactgatttttag
ctcagatgacatatctaatgtacagaaggcacgaatatgcaaaaggctggctaaagcaga
taagtttctagttgatggggctgatgagtacctgcagctgatggatgtagccagtcattt
aatgcgtaccctttttgacatgccccaggagatacagtttgattag

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