KEGG   Dendrobium catenatum: 110113577
Entry
110113577         CDS       T05027                                 
Name
(RefSeq) splicing factor SF3a60 homolog isoform X1
  KO
K12827  splicing factor 3A subunit 3
Organism
dct  Dendrobium catenatum
Pathway
dct03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110113577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dct03041]
    110113577
Spliceosome [BR:dct03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110113577
 Complex B
    110113577
 Complex C
   U2 SnRNP specific factors
    110113577
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N HD_assoc
Other DBs
NCBI-GeneID: 110113577
NCBI-ProteinID: XP_020701876
LinkDB
Position
Unknown
AA seq 508 aa
MSSTLLEVTRSAHEDVERLERLVVKELQREPASNRDQLFQSHRVRNMIDTLISTTHKLVE
VYEDKDNARKDEIAALGGQTASGVNLFGAFYDRLKEIREYHRRHPLARVIDPTEEFEELL
KEEPHIEFSGEEAFGRYLDMHELYNEYINSKFGEPVEYSAFLDTFSQFQKVPRHLKLTRQ
YKDYLTHLLEYLLSYFERTEPLQDLGRMFSKVESEFEELWADGKITGWENKDLANGHVQS
QESIIDLDYYSTVEELMEVGPEKLKEALGARGLKVGGTLQQRAERLFLMKHTPLDQLDKK
HFGKGSRTSQENGGSIVLQQNSMKEIALMEAKLQRMCEFFKERIIQTKENVEKKQALTYE
EMEAEREEEEVQADSESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN
HSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIQEAKELWERIQEKQGLNKWRP
DLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtcttccactctacttgaggtcacgcggtcggcccacgaggacgtggagcgcctagag
cgtctcgtcgtgaaggagctccagcgcgagcccgcctccaaccgcgatcaactcttccag
agccatcgcgtgcgcaacatgatcgataccttaatcagcaccacccataaactcgttgag
gtatacgaggacaaagataacgccaggaaggacgagattgctgcgcttgggggtcaaaca
gcaagtggcgtcaatctttttggtgccttctatgaccgattaaaagagattcgtgagtac
cataggcgtcacccacttgcacgagttattgatccaactgaggagtttgaggagttgctt
aaagaagaaccacacattgagtttagtggcgaggaagcttttgggcggtaccttgacatg
catgagttatataatgaatatattaactcgaagtttggggagcctgttgaatattcagca
ttcctggatacattttctcagtttcagaaggttcctcgccatctaaagctaacaaggcaa
tacaaagactacttgacacaccttctggaatacctactatcatattttgagcgtacagag
cccctgcaagaccttggaagaatgttttcaaaggtggagtctgagtttgaggagctatgg
gctgatggcaagatcactggatgggaaaataaagatttggcgaatggacatgttcagtca
caggagtctattattgatcttgattattacagtactgttgaagagctcatggaagtgggc
ccagaaaagctgaaggaggctttaggggctcgaggtttgaaagtcggtggcacacttcag
cagcgtgcagagaggctatttcttatgaagcacacacctttggatcaacttgacaaaaaa
cattttggcaaaggttctcgcacgtcccaagaaaatggtggatccattgttctacagcag
aactccatgaaagaaattgctttgatggaagctaaattgcaacgaatgtgtgaatttttt
aaggagcgaattatacaaacaaaagaaaatgttgagaagaagcaagccttgacatatgag
gaaatggaagcagagcgtgaggaggaggaggtgcaggctgatagtgaaagtgatgacgat
gaacagcaaatttacaaccctctcaaacttcctatgggctgggatgggaagcctatcccc
tattggctttataaacttcatggtcttggccaggaatttaagtgtgaaatatgtggaaat
cacagttattggggccgccgtgcttttgagcgccatttcaaggagtggcgacatcaacat
ggaatgcggtgccttggtatacctaacaccaagaatttcaatgaaattacttctattcag
gaagcaaaggagctgtgggaaagaatacaggaaaagcaaggattgaacaaatggcgacct
gaccttgaagaagaatatgaagacaaagagggcaacatctacaataagaaaacctacaca
gatctgcagcgccagggcctgatctag

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