Dendrobium catenatum: 110115078
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Entry
110115078 CDS
T05027
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110115078
Enzymes [BR:
dct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110115078
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110115078
NCBI-ProteinID:
XP_020703867
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MLLPILFFLLLLPPPSHPLLPPNSSHPDPDSVALDLLHQIALSRRLALADPSQCLTGNPI
DDCLLCSATDWRTDRFHLADCSIGFGRSALGGKNGLIYTVTDPSDSDPANPLPGTLRHAA
IQSSPLWIIFAASMSIHLNEELLVNSFKTIDGRGANVHIAGGACITLQYVSNVIIHNLHI
HDCVPAGNAIVRSSPTHAGFRGRSDGDGISIFGGRDIWIDHCALSNCADGLIDAIMGSTA
ITISNSYFSRHNEVMLMGHRDDYLPDSGMQITIAFNRFGEKLVQRMPRCRHGYFHIVNND
YTEWEMYAIGGSANPTINSQGNRYIAPPDPNAKEVTKRIETDEEEWNGWNWRTEGDILVN
GAFFVPSGEGLAALYDKASSVEPKSAEFIDELTRNAGVLGGPRDNGGQSSGAYPGANDGG
FAAGGGGMAIDGGGGGGGSGASGFFGMVFGGGARPLPSGFQLLLPLFVIFFFSSMYLYPL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgctcctccccatcctcttcttcctcctcctcctccctcccccatcccatcctctcctc
cccccaaactcctcccacccggaccccgattccgtcgccctcgacctcctccatcaaatt
gccctctcccgccgcctagccctcgccgacccttcccaatgcctcaccggcaaccccatc
gacgactgcttgctctgctccgccaccgattggcgaacggaccgcttccacctcgccgac
tgctccatcggcttcggccgctctgccctcggcggcaaaaatggcctcatctacaccgtc
accgacccctccgactccgatcccgccaaccccctcccaggcactctccgtcacgccgcc
atccaatcctcccccctctggatcatcttcgccgcctccatgtccatccacctcaacgaa
gaactcctcgtcaacagcttcaaaaccatagacggccgcggcgcaaacgtccacatagcc
ggcggtgcctgcatcaccctccaatacgtctccaatgtcatcatccacaacctccacatc
cacgactgcgtcccggccgggaacgcgatcgtacgatcctcccccacccacgccggtttc
cgcggccgatcagacggcgacgggatctcgatcttcggcggaagggatatatggatcgat
cactgcgcgctctctaattgcgccgatgggctcatcgatgcaataatgggatcgacggcc
atcacgatttcgaatagctatttctcgaggcataatgaggtcatgcttatggggcataga
gacgattacttgccggattctggtatgcagatcaccattgctttcaatcgatttggggag
aagctggtgcagaggatgccgcggtgcaggcatggctacttccatattgtcaacaacgat
tacacagaatgggaaatgtacgccattggtgggagcgcgaatcccaccattaacagccag
gggaatcgatacatagctccccccgacccaaatgcgaaggaggtgacgaagagaattgag
accgatgaggaagagtggaacgggtggaattggaggacggagggagacattttagtcaac
ggtgctttcttcgtgccgtcgggagagggattggcggcgctgtacgacaaagcgtcaagt
gtcgaacccaagtccgccgagttcatcgacgagctcacccggaacgccggcgtgctcggt
ggacccagggacaacggtggacagagcagtggcgcctatccgggagccaacgacggtggt
ttcgccgccggcggtggtggtatggcgatcgacggcggtggaggtggcggaggcagcgga
gcctcagggttttttgggatggtgtttggtggcggagcgcgcccgctaccttctggtttc
cagctgcttctgcctttatttgttatttttttcttctcttcgatgtatctctatccattg
tag
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