Dendrobium catenatum: 36482783 Help Entry 36482783          CDS       T05027                                  Symbol rpoB, DDH38_pgp077 Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism dct  Dendrobium catenatum Pathway dct03020   RNA polymerase Brite KEGG Orthology (KO) [BR:dct00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     36482783 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dct03021]     36482783 (rpoB)    03400 DNA repair and recombination proteins [BR:dct03400]     36482783 (rpoB) Enzymes [BR:dct01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      36482783 (rpoB) Transcription machinery [BR:dct03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      36482783 (rpoB) DNA repair and recombination proteins [BR:dct03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       36482783 (rpoB) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 TPR_TNPO3_IPO13_4th Motif Other DBs NCBI-GeneID:  36482783 NCBI-ProteinID:  YP_009472259 UniProt:  A0A342ZZY8 LinkDB All DBs Position CP AA seq 1070 aa AA seqDB search MLQNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFQKIEDRDQEIEFQLFVETYQLV EPLIKERDAVYESLTYSSELYVPAVLIWKTGRNMQEQTVFIGNIPIMNSFGTSIVNGIYR IVINQILQSPGIYYRSELEHNGISVYTSTIISDWGGRSELEIDRKARIWARVSRKQKISI LVLSSAMGSNIREILDNVCYPEIFLSFPNDKEKKNIGSKESAILEFYQQFACVGGDPVFS ESLCKELQKKFFQQRCELGKIGRRNMNRRLNLDIPQNNTFLLPRDLLAAVDHLIGMKLGM GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENTVRGTICGAIRHKLIPTPQNLVTSTS LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKWSYLGPGGLTGRTASFRIRDIHPSHYGR ICPIDTSEGINVGLIGSLAIHVKVGYWGSIESPFYKLSERSKEAQMVYLSPNRDEYYMVA AGNSLALNRGIQEQQVVPARYRQEFLTIAWEEIHLRSIFPFQYFSIGASLIPFIEHNDAN RALMSSNMQRQAVPLSRSEKCIVGTGLEGQTALDSGISAIAERKGKIIYTDTQKIIFSSN GDTLSIPLVMYQRSNKNTCMHQKTQVKRGKYIKKGQILAGGAATAGGELALGKNVLVAYM PWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHLTSQGPERITKDIPHLEARLLRNL DRNGIVMLGSWIETGDILVGKLTPQTASESSYAPEDRLLRAILGIQVSTSKETSLRLPIG GRGRVIDVRWIHRKGVSNYNPERIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDMP YLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKKHYRIGPFDERYEQEASRKLV FSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKSYILKLIHQVDDKIHG RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL GATIIGSTVPNPEGAPESFRLLVRELRSLALELNHFLVSEKNFQMNRKEA NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atgctccagaatggaaatgagggaatgtccacaatacctggatttagtcagatacaattt gagggattttgtaggttcattaatcagggcttgacggaagaatttcataagtttcaaaaa attgaagatagagatcaagaaattgaatttcaattatttgtggaaacatatcaattggta gagcccttgataaaagaaagagatgctgtgtatgaatcactcacatattcttctgaatta tatgtacccgcggtcttaatttggaaaaccggtagaaatatgcaagaacaaaccgttttt attggaaacatccctataatgaattcttttggaacctctatagtaaatggaatataccga attgtgatcaaccaaatattgcaaagtcccggtatttactaccgttcagaattggaacat aacggaatttctgtctataccagtactataatatcggattgggggggaaggtcggaatta gaaattgatagaaaagcaaggatatgggcccgtgtaagtagaaaacaaaaaatatctatt ctagttctatcatcagctatgggttcgaatataagagaaattctagataatgtttgttac cctgagattttcttgtctttcccgaatgataaagagaaaaaaaatattgggtcaaaagaa agtgctattttggagttttatcaacaatttgcctgtgtagggggggatccggtattttct gagtccttatgcaaggaattacaaaagaaattttttcaacaaagatgtgaattaggaaag attggtcgacgaaatatgaaccggagactgaatcttgatataccccaaaacaatactttt ttgttaccacgagatctattggctgctgtggatcatttgattggaatgaaattgggaatg ggtacacttgatgatatgaatcacttgaaaaataaacgtattcgttctgtagcagatcta ttacaggatcaattcggattggctcttgttcgtttagaaaatacggttcgaggaactata tgtggagcaatcaggcataaattgatacctactcctcaaaatttggtaacttcaacttca ttaacaactacttatgaatcgttttttggcctacaccctttatctcaagttttggatcga actaatccgttgacacaaattgttcatgggcgaaaatggagttatttgggtcctggagga ttgacgggacgaactgctagttttcggatacgagatatccacccgagtcactatggacgt atttgtcctattgacacgtccgaaggaatcaatgttggacttatcggatcattagctatt catgtgaaggttggttattggggatctatagagagtccgttttataaattatctgagaga tcaaaagaggcacagatggtttatttatcaccaaatagagatgaatattatatggtagca gcaggaaattctttggccttgaatcggggtattcaagaacaacaggttgttcctgctcga tatcgtcaagaattcctgactattgcatgggaagagattcatcttagaagcatttttccc ttccaatatttttcgattggagcttccctcattccttttatcgagcataatgatgcgaat cgagctttaatgagttctaatatgcagcgtcaagcagttcccctttctcggtccgagaag tgcattgttggaactgggttggaaggccaaacggctctagattcggggatttcagctata gctgaacgcaagggaaaaatcatttatactgatactcaaaagatcattttctcaagtaat ggggatactctaagcattccattagttatgtatcaacgttccaacaaaaatacttgtatg catcaaaaaactcaggttaagcggggtaaatacattaaaaagggacaaattctagcgggt ggtgcggctacagctggtggggaactcgctttaggaaaaaatgtattagtagcttatatg ccatgggaaggttacaattttgaagacgcagtactaattagcgaacgtctggtctatgaa gatatttatacttcttttcacatccggaaatatgaaattcagactcatttaacaagccaa ggtcctgaaagaatcactaaggatattccgcatttagaggctcgtttactccgaaattta gacagaaatggaattgtgatgctgggatcttggatagaaacaggtgatatcttagtaggt aaattaacacctcagacagcgagcgaatcttcatatgccccggaggatagattattacga gctatacttggcattcaggtatccacttcaaaagaaacttctctaagactacctataggg ggaaggggtcgagttattgatgtgagatggatccatagaaagggggtttccaattataat ccagaaaggattcgtgtatatatttcacagaaacgtgaaatcaaagtaggtgataaagta gctggaaggcatgggaataagggtataatttctaagattttgtctagacaagatatgccc tatttgcaagatggaacgcccgttgatatggtattcaatccattaggagtcccctcacga atgaatgtgggacagatatttgaatgttcgctcgggttagcgggggatctgctaaagaaa cattatagaatagggccctttgatgagagatatgagcaagaggcctcaagaaaactagtg ttttctgaattatatgaagccagtaagcaaacaaaaaatccatgggtatttgaacccgaa tatccgggaaaaagcagaatctttgatggaagaacaggagatctttttgaacaacctgtt ctaataggaaagtcctatatcctaaaattaattcatcaagttgatgataaaatccatgga cgttccagtgggcattacgcacttgttacacaacaaccccttagagggagggccaaacaa gggggacaaagagtaggagaaatggaagtttgggctctagagggatttggtgttgctcat attttacaagagatgcttacttataaatctgatcatattagagctcgtcaagaagtactt ggtgctacgattattggatcaacagtacctaatccagagggtgctccagaatcttttcga ttgctcgttcgagaactacgatctttggccctggaactgaatcatttccttgtatctgaa aagaacttccagatgaataggaaggaagcttga

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