KEGG   Musicola paradisiaca: Dd703_0535
Entry
Dd703_0535        CDS       T00927                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
dda  Musicola paradisiaca
Pathway
dda02024  Quorum sensing
dda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dd703_0535
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Dd703_0535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dda03019]
    Dd703_0535
   03036 Chromosome and associated proteins [BR:dda03036]
    Dd703_0535
Messenger RNA biogenesis [BR:dda03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Dd703_0535
Chromosome and associated proteins [BR:dda03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Dd703_0535
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ACS84346
UniProt: C6C8X5
LinkDB
Position
598703..599002
AA seq 99 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPGTNNYHGNNQAAQQQPQQDSDDAE
NT seq 300 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatccgttcttgaacgcactgcgtcgcgaacgtgtt
ccggtttcgatttatctggtcaacggcatcaagttgcaggggcagattgaatctttcgat
cagtttgtaattctgctgaagaatacggttagtcaaatggtatacaagcatgccatttcc
acggtggttccgtctcgcccggtatcgcatcacagcaataatcctggcaccaataactat
catggtaataatcaggccgctcagcagcagccgcaacaggatagtgatgacgccgaataa

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