Musicola paradisiaca: Dd703_3731
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Entry
Dd703_3731 CDS
T00927
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dda
Musicola paradisiaca
Pathway
dda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dd703_3731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dda03021
]
Dd703_3731
03400 DNA repair and recombination proteins [BR:
dda03400
]
Dd703_3731
Enzymes [BR:
dda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dd703_3731
Transcription machinery [BR:
dda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dd703_3731
DNA repair and recombination proteins [BR:
dda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dd703_3731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ACS87486
UniProt:
C6C4S9
LinkDB
All DBs
Position
complement(4323975..4328003)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGSAELQYVSYRLGEPVFDVKECQIRGVTFSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYSTEDILGLFFDKIVYEINNNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDGIERIEVPVEYIAGKVLAKD
YVDTSTGEVIAMANMELSLDLLARLSQAGHKRIETLFTNDLDHGPYMSETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDAIEGSGIL
SKEDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGVVT
DEIHYLSAIEEGNYVIAQANTNLDDEGHFIDELVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
TEELQILEAGLFARIHDVLVAGGVEAEKLGKLPRERWLELGLTDEDKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGSGVRQKVDLNTFSDEEVLRLADNLKKGMPIATPVFDGAKEAEIKELLK
LGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaagcgtccgcaa
gtgttggacataccttatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatccggaaggtcagtacggactggaagctgcgttccgttctgttttccccatccag
agctatagcggcagtgcagaactgcaatacgtaagctatcgtctgggcgagccggtattt
gacgttaaagaatgtcaaattcgcggcgtaaccttttctgcgccgttgcgcgttaagctg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgtaaaagacatcaaagaacaa
gaagtgtacatgggcgaaatcccgctcatgaccgacaacggtaccttcgtgatcaacggt
accgagcgcgttatcgtttcccagttgcaccgtagtccgggcgtgttcttcgacagcgac
aagggcaaaacccactcttccggtaaagtgctgtataacgcacgcattattccttaccgt
ggttcttggctggacttcgagttcgatccgaaagacaacctgtttgtgcgtatcgaccgc
cgtcgtaaattgccggcgactatcattctgcgtgcactgaattactccactgaagacatt
ctggggctgtttttcgacaagattgtttacgaaatcaacaataacaagctgcaaatggag
cttgttcccgaacgtctgcgcggtgaaaccgcctcttttgatattgaggctgacggcaag
gtttacgtcgaaaaaggtcgccgcatcacggcgcgccatatccgtcagttggaaaaagac
ggcatcgaacgtattgaagtgccggtggaatacatcgcgggcaaagtgttggccaaagat
tatgtcgataccagcactggcgaagttatcgctatggcgaacatggaactgtcgctggat
ctgttggctcgtctgagccaggccgggcacaagcgcatcgaaactctgttcaccaacgat
ctggatcacggtccatacatgtccgaaacggtgcgtgttgatccgactaatgatcgtctg
agcgcgttggttgaaatctaccgcatgatgcgtccgggcgagccgccgacacgcgaagcg
gcggaaagcctgttcgaaaacctgttcttctccgaagaccgctacgatctgtctgcggtt
ggccgcatgaagtttaaccgctccctgttgcgcgacgcgatcgaaggatccggcatcctg
agcaaagaagacatcattgatgtcatgaaaaagctcatcgatatccgtaacggtaaaggc
gaggtcgatgatatcgaccacctgggcaaccgtcgtatccgctccgtgggcgaaatggcg
gaaaaccagttccgcgtcggtctggtgcgcgtagaacgtgcggtgaaagagcgtctgtct
ctgggcgatttggacaccctgatgccgcaggacatgatcaacgccaagccgatttccgcg
gcggtgaaagagttcttcggttccagccagctgtcccagtttatggatcagaacaacccg
ctgtccgaaattacgcataaacgccgtatttccgcattgggccccggcggtctgacccgt
gagcgtgccggcttcgaagtgcgagacgttcacccgacccactatggtcgtgtatgtccg
atcgaaacgccggaaggtccgaacatcggtctgatcaactcgctgtctgtgtacgcacag
accaacgaatacggtttcctggaaaccccgtatcgccgtgtacgcgatggcgtggtgact
gacgaaattcattacctgtctgcgattgaagaaggcaactacgttattgctcaggcgaac
accaacctggatgacgaaggtcacttcatcgacgaactggtgacttgccgtagcaagggc
gagtccagcttgttcagccgcgatcaggttgactacatggacgtttccactcagcaggtg
gtctctgtgggggcgtccctgatcccgttcctggaacacgatgacgccaaccgcgccctg
atgggtgcgaacatgcaacgtcaggcggttccgaccctgcgcgccgacaagccgctggtg
ggcaccggtatggaacgtgctgttgcggttgactccggtgttaccgcggtcgctaaacgt
ggcggtaccgtacagtatgtcgacgcatcccgtattgttatcaaggtgaatgaagacgag
atgtatccgggtgaagcgggcatcgacatctacaacctgaccaaatacacccgttccaac
cagaacacctgcatcaaccagatgccgtgtgtgtcgctgggcgagccggttgagcgcgga
gacgtattggccgacggcccgtctaccgatctcggtgagctggcgctgggtcagaacatg
cgcgtcgcgttcatgccctggaacggctacaacttcgaagactccatcctcgtttccgag
cgtgtagtgcaggaagatcgtttcaccaccatccacattcaggaattggcgtgcgtgtcc
cgcgacaccaagctggggcctgaagagattacggccgatatcccgaacgtgggtgaggct
gcgctctccaaactggatgaatccggcatcgtttacatcggtgcggaagtgaccggcggc
gatatcctggtcggtaaagtgacgccgaaaggcgaaacccagctgacgccggaagaaaaa
ctgctgcgcgccatctttggtgaaaaagcgtctgacgttaaagattcttctctgcgcgtg
ccgaacggcgtttccggtacggttatcgacgtgcaggtctttacccgcgatggtgtggaa
aaagacaaacgtgcgctggaaatcgaagaaatgcagttgaagcaggccaaaaaagacctg
actgaagagctgcagattctggaagccggcctgtttgcgcgtatccatgacgtgctggtc
gccggcggcgttgaagccgagaaactgggcaagctgccgcgcgagcgttggctggaactg
gggctgaccgacgaagataaacagaatcagctggaacagttggctgagcagtatgacgag
ttgaaacacgaattcgagaaaaaactcgaagccaaacgtcgcaaaatcacccagggtgat
gatctggcgccgggcgtgttgaagatcgtcaaggtgtatctggcggttaaacgtcagatt
cagccgggtgacaagatggcgggccgtcacggtaacaagggtgttatctccaagatcaac
ccgatcgaagatatgccttatgacgaaaacggtaccccggtcgacatcgtgctgaacccg
ctgggcgttccatcgcgtatgaacatcggtcagattctggaaacccacctgggtatggcg
gcgaaaggcatcggcgacaagatcaacgccatgctcaagcagcagcaggaagtggccaag
ctgcgtgaattcattcagcgtgcttacgacctgggcagcggcgtgcgtcagaaggtggat
ctgaacaccttctccgacgaagaagtgctgcgtctggccgacaacctgaaaaaagggatg
ccgatcgccacgccggtgttcgatggcgcgaaagaagcggaaatcaaagaactgctgaag
ctgggcgatctgccgacttccggtcagatccggctgtacgacggtcgtaccggcgaacag
ttcgaacgtccggttactgtgggctacatgtacatgctgaagttgaaccacctggtcgac
gacaagatgcatgcccgttccaccggttcgtacagcctggttactcaacagccgttgggt
ggtaaggcgcagttcggtggtcagcgcttcggtgagatggaagtgtgggcgctggaagct
tacggcgcagcctataccctgcaggaaatgctgacggtgaaatccgatgacgtgaatggt
cgtaccaagatgtacaaaaacatcgtggacggcgatcaccggatggagccgggcatgccg
gaatctttcaacgtactgctgaaagaaatccgctccttgggcatcaacatcgagctggaa
gacgagtaa
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