Oleidesulfovibrio alaskensis: Dde_1976
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Entry
Dde_1976 CDS
T00294
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
dde
Oleidesulfovibrio alaskensis
Pathway
dde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dde_1976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dde03400
]
Dde_1976
DNA repair and recombination proteins [BR:
dde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Dde_1976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_23
AAA_22
AAA_27
AAA_14
AAA_29
Rad17
Motif
Other DBs
NCBI-ProteinID:
ABB38773
UniProt:
Q30ZX3
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Position
2020900..2023614
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AA seq
904 aa
AA seq
DB search
MTSHSPKLTPMFEQYMNIKAEYPDALLFYRMGDFYELFFEDAEVAARELQIALTCRNPNA
ENKVPMCGVPHHSARSYISQLVDKGYKVAICEQMEDPREAKGLVKRGVIRVLTSGTALED
ENLSPKAHTYLGALCWDKSEGAGGFAWVDFSTGEWSGLQSRKEQELWQWVQKMAPRELLL
ADTLTPPASLELTETQFSKVPERAYFDYKRSAEKIMSAQQVAELGALGLENRKELVRACG
ALLTYLSQTQKQDLNHLCQFKPLNLNRHLLLDEITERNLELFRRLDGRKGKGTLWHVLDH
TVTPMGGRLLQERLKHPWREQAPIDETQEAVSHFFAHNTLRRQLREALDTVYDIERLSTR
IFLNRATPRDYVALRQSLKALPAVRELLEAPQTGDGRYATPEEQLGAALPPFLHRMLKSW
DDLADYHDLLEKALVDNPPHVITEGGLFRQGFHPALDELMDLSEHGASKLHDLLAEVQQT
TGISKIKLGNNRVFGYYFEVPKSVSEELPDTFVRRQTLANAERYTSERLKELEEKLFSAA
DKRKTMELKLFQQLREHVAQARPRVLFMADLLATLDHWQGLAEAARHWNWVRPVLHDGQD
IVIREGRHPVVEAVQGPAGFIPNDLRIDDQRRLLLITGPNMAGKSTVLRQAAIICILAQI
GSFVPAREARIGLCDRIFSRVGASDNLAQGQSTFMVEMMETARILRQATRRSLVILDEIG
RGTSTFDGLALAWAVVEELMKKQQAGIRTLFATHYHELTSLEGTIPGVHNMNIAIKEWGG
EIVFLRRLVPGPSDRSYGVEVAKLAGVPQNVVQRARQILELLEQKSKADGTRRPASYHEA
QPLLPGMPEPPSTASAEPPQTVTPPEPPVLTALRDLDTDNLTPLEALTVLTEWKTLWGAG
KNEC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgactagccattctccaaagctgaccccgatgttcgaacaatacatgaacatcaaggcc
gagtatcctgacgccctgctcttttaccgtatgggcgacttttacgagctgttctttgag
gacgcggaagtcgctgcccgcgagctgcagatagccctgacatgccgcaaccccaatgcc
gaaaacaaagtgcccatgtgcggtgtgccccatcactccgcacgcagctacatcagccag
ctggtggataaaggctacaaagtcgccatctgcgaacagatggaagacccgcgagaagcc
aaggggctggtgaagcggggagtcataagagttttgacctccggcactgcgctggaggac
gaaaacctttcccccaaggctcacacctatctcggggcattgtgctgggacaagtcggaa
ggagccggcggatttgcatgggtggacttttccacaggcgagtggtccggactgcaaagc
cggaaagaacaggaactctggcaatgggttcagaaaatggcgccccgcgaattgctgctg
gccgacacgctgacaccgcctgcatcgctggaactgaccgaaacccagttcagcaaagtg
ccggaacgcgcttattttgattacaaacgctcggcggaaaagatcatgtctgcccagcag
gttgccgaactcggcgcactggggctggaaaaccgcaaagagctcgtccgggcctgcggg
gcgctgctcacatatctttcccagacacagaagcaggaccttaaccacctttgccagttc
aagccgctgaacctgaaccgacatctgctgcttgacgaaataaccgagaggaatctcgag
cttttcagacggctggacggtcgcaagggcaaaggcaccctgtggcatgttctggaccat
acggtcacccccatgggcggaagactgctgcaggaacgcctgaaacacccgtggcgcgaa
caggcccccattgacgaaacgcaggaagccgtttcgcacttttttgcccacaacacactg
cgcagacagctcagagaagcacttgatacggtttatgacatcgagcggctgagcacccgg
atttttctgaaccgggcaaccccaagggattacgtggcgctgcggcagagcctgaaagca
ctgccggcagtaagagaactgctggaggccccgcagacaggagacggcagatacgccact
ccggaagaacagctgggggccgccctgccgccctttctgcacagaatgctcaaaagctgg
gatgaccttgccgactaccacgatcttctggaaaaagcgctggtagacaacccgccccac
gtcatcacggaaggcggactgttccgtcagggattccaccctgctctggacgagctgatg
gatctctccgaacacggagcctcgaaattgcatgacctgcttgcagaggtacagcagacc
acaggcatcagcaaaataaaactcggcaataacagagtgttcggttattattttgaagta
ccgaagtctgtttcggaagaactgcccgacacctttgttcgccgtcagacgctggccaac
gccgaacggtatacatcagagcgcctcaaggagctggaagaaaagctgttttcagcagcc
gacaagcgcaagaccatggaactgaagctgtttcagcaactgcgcgagcatgtggcccaa
gcccgaccgagagtgcttttcatggcggatctgctggccacccttgaccactggcaggga
ctggcggaagccgcccggcactggaactgggtgcgcccggttctgcatgacgggcaggat
attgtcatccgcgaaggacgccatcctgtggtggaagccgtacagggacctgcgggattc
atccccaacgatctgcgcatagatgaccagcgccgcctgctgctgattaccggccccaac
atggccggcaagtccacagtcctgagacaggctgcgattatctgcattcttgcccagata
ggttcttttgttcctgcacgggaggcgcgcatagggctgtgcgaccgtattttttcgcgt
gtgggggcttcggacaatctggcgcaggggcagtccacattcatggttgaaatgatggag
acagcccgtattctgcggcaggccaccaggcgcagtctggtcatacttgatgaaatcggc
cgcggcacatcaacctttgacggactggctctggcgtgggctgtagttgaagaacttatg
aaaaaacagcaggccggcatacgcacgctgtttgccacccattaccacgagctgacgtcg
ctggagggaaccattcccggcgtgcacaacatgaacatcgccataaaggaatggggaggc
gagattgtctttctgcgccggctggtgcccggtccttccgaccgcagctatggtgtagag
gtggcaaagctggccggagtaccgcaaaacgtggtgcaacgtgcccgacagattctggag
ttgctggagcagaaaagcaaagctgacggaaccagacgcccggcatcataccacgaagcc
cagccgctgctgccgggtatgcccgaaccgccatcaacagcaagtgcagaaccacctcag
accgtcacgccgcctgagcctcccgtgcttaccgccctgcgtgaccttgacacggacaac
ctgacaccactggaagcccttaccgtcctgacggaatggaaaactttatggggagccgga
aaaaatgaatgctga
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