Deferribacter desulfuricans: DEFDS_0255
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Entry
DEFDS_0255 CDS
T01188
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf02024
Quorum sensing
ddf03060
Protein export
ddf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
DEFDS_0255 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DEFDS_0255 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DEFDS_0255 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ddf02044
]
DEFDS_0255 (ffh)
Enzymes [BR:
ddf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
DEFDS_0255 (ffh)
Secretion system [BR:
ddf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
DEFDS_0255 (ffh)
Eukaryotic Sec-SRP protein
DEFDS_0255 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
AAA_17
AAA_33
AAA_30
KTI12
CLP1_P
AAA_18
AAA_28
ResIII
APS_kinase
ATP-synt_ab
GLUCM-like_C
ATP_bind_1
AAA
cobW
nSTAND3
6PF2K
FIST_C
AAA_31
AAA_16
ABC_tran
AAA_5
Thymidylate_kin
nSTAND_NTPase7
AAA_19
CPSase_L_D1
Fe-ADH
MMR_HSR1
AAA_14
YqeC
FAM117
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BAI79763
UniProt:
D3PAZ0
LinkDB
All DBs
Position
complement(257696..259039)
Genome browser
AA seq
447 aa
AA seq
DB search
MFATLHDKLNAVFKKIKGQAKITEDNIKDAVKQVRLALLEADVNYKVVKKFISAVQEKAL
GEEVLKSLTPDQVFIKIVHDELVNVLGGDDQSTKIKLNPIPPTKIMLVGLQGSGKTTTAG
KLAKYFQKNGKDVLLVADDIYRPAAIDQLEILGKQLKVDVFSKRDEQDAVKIAKEAVQHA
KSAAKDVVIIDTAGRLHIDETLMEELKNIKEAINPDEILFVADAMTGQDAVNVAKTFNEM
LDITGVILTKLDGDARGGAALSIREVTGKPLKFVGTGEKLDAFEPFYPDRMASRILGMGD
IVTLVEMAQDAIEEDEAEKLATKIQKKGLDFNDMLQQMKMIKKMGSFESILKLLPGFSGL
GNIDVDESNFKRIEAIINSMTPLERTNYKILNASRKRRIAKGSGTSVSEVNKLIQQLQQM
NKMMKKFKKQFSGKDKIDKNMLKNLFR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctacactgcatgataagttgaatgccgtctttaaaaagataaaaggacaggca
aaaataactgaagataatataaaagatgctgtaaaacaagtaaggttagcccttcttgaa
gccgatgttaactataaagtagtcaaaaaatttatatccgctgtccaagaaaaagccctt
ggcgaagaagtacttaaaagtttaacccctgaccaagttttcataaaaatagttcacgac
gaattagtaaatgttttaggtggtgacgaccaatccaccaaaataaagctcaaccctatc
cctcccacaaaaatcatgcttgttggtcttcaaggttctggtaaaaccaccactgcaggt
aaattggctaaatatttccaaaaaaatggcaaagatgtcttattggttgctgatgatatt
tatagacctgcagcaattgaccagttagagattttaggtaaacaactaaaagttgatgtt
ttttctaaaagggatgagcaagacgctgtaaagatagcaaaagaagcagtacaacatgct
aagtctgctgccaaagatgtagtgattatagacaccgctggccgccttcacatagatgaa
acattgatggaagaactcaaaaatatcaaagaagctataaatcctgatgaaattctgttt
gtagctgatgccatgactggccaggacgctgttaatgtagcaaaaacatttaatgaaatg
ttagatataactggtgtcattctcacaaagttagatggtgatgcaaggggtggtgctgca
ttatctatcagagaagttactggtaaaccattaaaatttgttggtactggtgaaaaatta
gatgcttttgagcctttttatcctgacaggatggcatccagaattttggggatgggtgat
atcgtaacacttgtggaaatggctcaggacgcaatagaagaggatgaagcagaaaaatta
gccacaaaaatacagaaaaaaggacttgactttaacgatatgcttcaacaaatgaaaatg
ataaaaaaaatgggttcatttgaaagtatcttaaaactactaccaggattttctggcctt
ggaaatattgatgtggatgaaagtaattttaaaagaattgaagctattataaactcaatg
acaccactagaacgaactaattataaaattttaaatgcaagtagaaaaagacgtatagca
aaaggtagtggcacatcagtttctgaagtaaacaaattaatacaacaacttcaacaaatg
aataaaatgatgaaaaaattcaaaaaacagttttcaggcaaagataaaatagacaaaaat
atgttaaaaaatctttttagataa
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