Dictyostelium discoideum (cellular slime mold): DDB_G0291652
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Entry
DDB_G0291652 CDS
T00245
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi00260
Glycine, serine and threonine metabolism
ddi00460
Cyanoamino acid metabolism
ddi00630
Glyoxylate and dicarboxylate metabolism
ddi00670
One carbon pool by folate
ddi01100
Metabolic pathways
ddi01110
Biosynthesis of secondary metabolites
ddi01200
Carbon metabolism
ddi01230
Biosynthesis of amino acids
ddi01240
Biosynthesis of cofactors
ddi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DDB_G0291652 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DDB_G0291652 (shmt2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DDB_G0291652 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DDB_G0291652 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DDB_G0291652 (shmt2)
Enzymes [BR:
ddi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DDB_G0291652 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
8628075
NCBI-ProteinID:
XP_635129
dictyBase:
DDB_G0291652
UniProt:
Q54EW1
LinkDB
All DBs
Position
6:complement(91358..93578)
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AA seq
481 aa
AA seq
DB search
MLKSLSKLTPSIRGVVSINRSFCTKKFLPTNRSVSESDPEIYDLMMKEKQRQFTGLELIA
SENFTSRAVMESIGSCFTNKYAEGLPGARYYGGNEVVDQLENLCIKRALETFNLNPEEWG
VNVQPYSGSTANFAAFTGLLKPHDRIMGLDLPSGGHLTHGYQTDKKKISATSIFFESMPY
QVNETGYVDYNKMEANAALFRPKLLIAGASAYPREWDYERMRKIADKHGAYLLCDMAHIS
GMVAGKQAISPFLFCDVVTTTTHKTLRGPRAGLIFFRKTKRRDAKGNIIDDDLENRINFA
VFPSCQGGPHENTIAGIAVALKEASSPDFQEYTKQVRRNSQTMGEELKKRGYSLVTEGTD
NHLVLWDLRPQGITGSKIEKACDEAHITVNKNAVYGDTNAIAPGGVRLGAPALTSRGLKE
QDFVKVVDFLDRVVKISLDIQSKVGKKMPDFQRAIADNQDLKQIRQEVKEFSTKFGMPGE
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtcattatccaaacttacaccctcaattagaggagtggtttcaataaacaga
agtttttgcaccaaaaaattcttacctacaaatagatcagtcagtgaatcagatccagag
atttatgatttaatgatgaaagagaaacaaagacaatttacaggtttagaattaattgct
tctgaaaattttacatctagagcagttatggaatcaattggatcatgttttacaaataaa
tatgcagagggtttaccaggtgcaagatattatggtggtaatgaagttgttgatcaatta
gagaatttatgtattaaaagagcattggaaacatttaatttaaatccagaagaatggggt
gtaaatgtacaaccatatagtggcagtactgctaattttgctgctttcactggtttatta
aaaccacatgatcgtataatgggtttagatttaccatctggtggtcatttaacacatggt
tatcaaacagataaaaaaaaaattagtgcaactagtattttctttgaatcaatgccatat
caagttaatgaaacaggttatgtagattataataagatggaggcaaatgcagcattattt
agaccaaaacttttaattgcaggtgcatcagcatatccaagagaatgggattatgaaaga
atgagaaagattgctgataaacatggtgcctatttactttgtgatatggcacatattagt
ggtatggtcgcaggtaaacaagcaatttcacctttccttttctgtgatgttgtaaccaca
accacccataaaactttaagaggtccacgtgctggtcttatctttttcagaaagactaaa
cgtagagatgccaaaggtaacatcatcgatgatgacctcgaaaatagaattaactttgca
gttttcccatcttgtcaaggtggtccacacgaaaatactatcgctggtattgctgtcgct
ttgaaggaagcctcatctccagatttccaagaatatactaaacaagtcagaagaaactct
caaaccatgggcgaagaactcaaaaagagaggttattcactcgtaaccgaaggtaccgat
aatcatttagttctttgggatcttagaccacaaggtatcactggcagtaaaattgaaaag
gcttgtgacgaagctcatatcactgtaaataaaaatgctgtctatggtgatacaaatgca
atcgctcctggtggtgtacgtttaggtgctcctgctctcacaagcagaggtctcaaagaa
caagactttgttaaagtcgtcgatttcttagatcgtgtcgttaaaatctctttagatatc
caatcaaaagttggtaagaaaatgccagatttccaaagagcaatcgctgataatcaagat
ttaaaacaaattagacaagaagttaaagaattctctactaaatttggtatgccaggtgaa
ttataa
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