Desulfitobacterium dichloroeliminans: Desdi_2121
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Entry
Desdi_2121 CDS
T02390
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ddl
Desulfitobacterium dichloroeliminans
Pathway
ddl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ddl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desdi_2121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddl03400
]
Desdi_2121
DNA repair and recombination proteins [BR:
ddl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desdi_2121
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_2
HHH_5
5_3_exonuc
HHH
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AGA69562
UniProt:
L0F8Q1
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All DBs
Position
2163463..2165229
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AA seq
588 aa
AA seq
DB search
MERLRKKLSLLPDKPGVYLMKDTSGQIIYVGKAKILKNRVRSYFTGSHNGKTQLMISQIA
DFETILTDSEVEALLLECNLIKKHNPKYNILLRDDKTYPFITITDEDHPRILVTRQVKKG
AGKYYGPYPNATAAKEAARLLNRLFPFRKCRQIPSKPCLYYHLGQCLGPCTQNVPRVAYE
TIRKDAATFLKGDQGAILKALQSKMIQAAENLEFERAQEFRDLIEDLKKVGEKQNITLND
FVDRDVVGYAFSRDQLCIQIFYLRQGKLLSRDNFIFPYYEEPEEAFISFLAQFYTESPTL
PQEILLPPLDLSVLGKLFPMVIPQKGQKHDLVQMAMENAQTTLHEQISIEIRDLEECTQA
LEEIGNALNIPSPRTIESFDISNIAGTHSVAGMIQFMDGKPNRSQYRKFKIQPMPTMDDT
ASMHQVIERRYARLLQESLPLPDLILVDGGKGQINAAKEALAALKVDIYVAGMVKNDRHQ
TSVLMDSAGHPHFFERRSAGFRLLERIQNEVHRFAITFHRQQRTKSMMLSELDGIPGVGQ
KRRQQLLRYFKSIDNIRQANLEDLQKAGLPSSAAAAIYAHFNDKGVKL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggagagacttcgcaaaaaacttagtttattaccggacaaaccgggagtttatcttatg
aaagatacttccggccaaatcatatatgtaggcaaagccaaaatccttaaaaaccgagtc
cgttcgtatttcacgggttcccataatggaaaaactcagctgatgattagccaaattgca
gactttgagactattctcacggattcagaagtagaggccttgcttttagaatgcaattta
atcaaaaaacataatcccaaatacaatattttattgagagatgataaaacctaccctttt
ataacgattaccgatgaagatcatccgcgcatcttagtaacacggcaggtaaaaaaggga
gcaggaaaatattacggaccctatcctaatgcgacagcagccaaggaagcggcgcgcttg
ctgaatcgacttttcccctttcgcaaatgtcgtcagattcctagcaagccctgtctttac
tatcatcttggtcaatgtctaggtccatgtacccagaatgtgccccgagtggcctatgag
actattcgcaaggatgctgccacctttctcaagggggatcaaggagccatccttaaagcc
ttacagtccaagatgatacaggctgcggagaacttagaatttgaacgagcccaagaattt
agggacctgattgaagatcttaagaaagtcggagaaaagcagaatatcaccttaaacgac
tttgtggatcgagatgtggtaggatatgctttttctcgagatcaactatgtatacaaatt
ttttatctacgccaaggcaaactcctctcccgggataattttatcttcccctattatgaa
gaaccggaagaggccttcatctcttttttagcccagttctataccgaaagccccaccctt
ccccaagaaatactcttgcctccgcttgatctcagcgtattaggcaagcttttccccatg
gttatacctcaaaagggccaaaagcatgatttagtccagatggccatggaaaatgcccaa
accactttacacgaacagatctccatcgaaattcgcgatttggaagaatgcacccaagcc
ctagaggaaatcgggaatgctttaaacataccctccccgcgaacgatcgaatcctttgac
atttccaatattgcgggaactcatagtgtcgctggtatgatacaattcatggatggaaaa
ccgaatcgcagtcaatatcgcaagttcaagatacagcccatgcccactatggatgacaca
gcctccatgcaccaagtgatcgagcgacgttatgcacgcctccttcaagaaagcctcccc
ctcccagatctaattctcgtggatgggggtaagggtcagatcaatgcggcaaaagaagcc
ctcgcagccttgaaggttgatatttatgtagcgggtatggtcaaaaatgatcggcatcaa
acctcagttctaatggactcagcaggacatccccatttttttgaacgtcggtcagccggt
ttccgcctactagaacgaattcaaaatgaagtccatcgttttgcaatcaccttccatcga
cagcaacgcacaaaaagcatgatgctctctgagcttgacggtatacctggtgtcggacag
aagagaagacaacaactattgcggtattttaaatcgatagacaacatccgccaagccaac
ttagaggatcttcagaaagcagggcttccttcttcagcagctgccgccatatatgcacac
tttaatgacaaaggagttaagctatga
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