Pseudodesulfovibrio mercurii: DND132_1025
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Entry
DND132_1025 CDS
T01709
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ddn
Pseudodesulfovibrio mercurii
Pathway
ddn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DND132_1025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddn03400
]
DND132_1025
Enzymes [BR:
ddn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
DND132_1025
DNA repair and recombination proteins [BR:
ddn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DND132_1025
RecFOR pathway proteins
DND132_1025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
RRXRR
Motif
Other DBs
NCBI-ProteinID:
EGB14238
UniProt:
F0JII6
LinkDB
All DBs
Position
complement(1116506..1117009)
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AA seq
167 aa
AA seq
DB search
MAEGLVVLGLDPGTRVTGYGIVRELSGKAELVDTGTIRTPVREDMATRMGVLFNRLQELI
RLHAPAEAAIENVFVSKNPSSALKLGQARGACMAACAVHNIPMGEYEPSKVKKNLVGLGS
APKSQVAYMVAHCLGVKKPDWPEDASDALAIAICHLNERRMRRLTGV
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagggctggtcgtcctggggctggaccccggtacgcgggtcacgggttacggc
atcgtccgggagctttcgggcaaggccgaactcgtggacaccggcaccatccgcaccccg
gtccgggaggacatggccacccgcatgggggtgctcttcaaccgcctccaggaactcatc
cggctccatgcaccggccgaggccgccatcgaaaacgtgtttgtttccaagaacccctcg
tccgccctcaaactggggcaggcgaggggtgcctgcatggccgcctgcgccgtgcacaac
atccccatgggcgagtacgagccgtccaaggtcaaaaagaacctggtcggcctgggcagc
gcgcccaagtcccaggtggcctacatggtcgcccactgcctgggcgtgaagaaacccgac
tggcccgaggacgcctccgacgccctggccatcgccatctgccacctgaacgagcggcgc
atgcgtcgcctgaccggcgtctga
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