Delphinus delphis (saddleback dolphin): 132414947
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Entry
132414947 CDS
T11117
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03020
RNA polymerase
ddp03420
Nucleotide excision repair
ddp05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132414947 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
132414947 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
132414947 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddp03021
]
132414947 (POLR2A)
03400 DNA repair and recombination proteins [BR:
ddp03400
]
132414947 (POLR2A)
Enzymes [BR:
ddp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132414947 (POLR2A)
Transcription machinery [BR:
ddp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
132414947 (POLR2A)
DNA repair and recombination proteins [BR:
ddp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
132414947 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
132414947
NCBI-ProteinID:
XP_059853927
LinkDB
All DBs
Position
19:50793112..50813172
Genome browser
AA seq
2000 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDVVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGEYLLQDHQ
ARQALLAASWSTTSSSLVWPLGVKELSKKLVIVNGDDPLSRQAQENATLLFNIHLRSTLC
SRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYA
GVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVT
ANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVARISPWLLRVELDRKHMTDRKLTMEQ
IAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIES
NMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEK
DVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGH
LMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGC
FDLLLDAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGA
WSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMS
PSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYS
PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP
SYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSP
TSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPT
SPTYSLTSPAISPDDSDEEN
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctcagtccggatgaactgaaacgaatgtctgtgacagagggcggc
atcaaatacccagagaccaccgagggaggccgccccaagcttggggggctgatggatccg
aggcaaggggtgattgagaggactggccgctgccaaacctgtgcaggaaacatgacagag
tgtcctggccactttggccacattgagctggccaaacctgtgttccatgtcggcttcctg
gtcaagacaatgaaagttttgcgctgcgtctgcttcttctgctccaaattgcttgtggac
tctaacaacccaaagatcaaggacattttggctaagtccaaggggcagcccaagaaacgg
ctcacacacgtctatgacctctgcaagggcaaaaacatctgcgagggcggggaggagatg
gacaacaagttcggtgtggagcagcctgagggcgatgaggatttgaccaaagaaaagggc
cacggcggctgtgggcggtaccagccccggatccggcgctccggcctggagctgtatgca
gagtggaagcacgtcaacgaggactctcaggagaagaagatcctgctgagtcctgagcgg
gtgcacgagatcttcaaacgcatctcagatgaggagtgcttcgtcctgggcatggagcct
cgctacgcccggcccgagtggatgattgtcactgtgctgcccgtgcccccgctctccgtg
cggcctgctgttgtgatgcagggctctgcccgcaaccaggatgacctgacacacaaactg
gccgacatcgtgaagatcaacaatcagcttcggcgcaacgagcagaacggcgcggccgcg
catgtcatcgctgaggacgtgaagctcctccagttccacgtggccaccatggtggacaac
gagctgcctggcttgcctcgtgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcggttgaagggcaaggaaggccgtgtgcgcgggaacctgatgggcaagcgggtggac
ttctcggcccgcactgtcatcacccccgaccccaacctctccattgaccaggttggcgtg
cctcgctccattgccgccaatatgacctttgcggagatcgtcacccccttcaacattgac
agacttcaggaactagtgcgcagggggaacagccagtacccaggggccaagtacatcatc
cgggacaacggtgatcgcattgacctgcgtttccaccccaaacccagtgaccttcacctg
cagactggctataaggtggaacggcacatgtgcgatggggacattgttatcttcaaccgg
cagccaactttgcacaaaatgtccatgatgggacatcgggttcgcatcctgccctggtct
acttttcgcttgaatcttagtgtgacaactccatacaatgccgattttgatggggatgag
atgaacttgcacctgccacagtccctggagacacgggctgagatccaggagctcgccatg
gtgccacgcatgattgtcaccccccagagcaatcgcccggttatgggcattgtgcaggac
acgctgaccgcagtgcgcaaattcaccaagagggacgttttcctggagcggggggaggtg
atgaacctcctgatgttcctgtccacgtgggatggcaaggtcccacagccagccatcctg
aagccccggcccctgtggacagggaagcagatcttctccctcatcatacccggccacatc
aactgtatccgcacccacagcacccatcccgatgatgaggatagtggtccttacaagcac
atctctcctggggacaccaaggtggtggtggagaacggggagctgatcatgggcatcctg
tgtaagaagtctttgggcacatcagctggctccctggtccacatctcttacctagagatg
ggtcatgacatcacccgcctcttctactccaacattcagactgtcattaacaactggctc
ctcattgagggtcataccattggcattggggactccattgctgattctaagacttaccaa
gacattcagaacactattaagaaggccaagcaggatgtaatagaggtgattgagaaggcg
cataacaacgagctggagcccaccccggggaacactttgcggcagacctttgagaaccag
gtgaaccgcattctcaacgatgcccgagacaagactggctcctctgcccagaaatcccta
tctgaatacaacaactttaagtcaatggtggtgtccggggctaaaggttccaagatcaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaagcggatcccgttt
gggttcaagcaccggactctgcctcacttcatcaaagatgactatgggcctgagagccgt
ggcttcgtggagaactcctacctggccggcctcacgcccaccgagttcttcttccatgcc
atggggggtcgtgaggggctcatcgacacagctgtcaagactgctgagactggatacatc
cagcggcggctgatcaaatccatggagtcggtgatggtgaagtatgacgccaccgtgcga
aactccatcaatcaggtggtacagctgcgctatggtgaagacggcctggcgggcgagagc
gttgagttccagaacctggctaccctcaagccttccaacaaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctgcggcgcaccctgcaggaggatgtggtgaag
gacgtgctgagcaatgcacacattcagaacgagctggagcgagaatttgagcggatgcgt
gaggacagggaggtgctcagggtcatcttcccaactggtgacagcaaggttgtcctcccc
tgtaacctgctgcgcatgatctggaacgctcagaagatcttccacatcaaccctcgcctt
ccctctgacctgcaccccatcaaggtggtagagggtgagtacctgcttcaggaccaccag
gccaggcaggctctgctagcagcgtcctggtctacaacctcttcatccctcgtttggccc
ttaggtgtcaaggagctgagcaagaagctggtgattgtgaatggggacgacccgctgagc
cggcaggcccaggagaacgccaccttgctcttcaacatccacctgcggtccacgctgtgc
tcccgccgcatggccgaggagtttcggctcagcggagaggccttcgactggctgctcgga
gagatcgagtccaagttcaaccaagccattgcccatcctggggaaatggtgggagctctg
gctgcacagtcccttggagaacctgccacccagatgactctgaacaccttccactatgct
ggtgtgtccgccaagaatgtgacactgggtgtgccccgacttaaggagctcatcaacatt
tccaagaagccaaagaccccctcacttactgtcttcctgctgggccagtctgctcgagat
gctgagagagccaaggatattctgtgccgcctggaacatacaacgctgaggaaggtgact
gccaacacggccatctactatgaccccaacccccagagcacggtggtggcagaggatcag
gagtgggtgaatgtctactatgagatgcctgactttgatgtggcccgaatctccccctgg
cttttgcgggtggagctggaccggaagcacatgactgatcggaagctgaccatggagcag
attgccgagaagatcaatgctggtttcggtgatgacttgaattgcatctttaacgatgat
aatgcagagaagctggtgctccgtatccgcatcatgaacagtgatgaaaacaagatgcaa
gaggaagaagaggtggtggacaagatggatgacgacgtcttcctgcgctgcatcgagtcc
aacatgctgacagatatgaccctgcagggcatcgagcagatcagcaaggtgtacatgcac
ttgccgcagacggacaacaagaagaagatcatcatcacagaggacggggagttcaaggcc
ttgcaggagtggatcctggagacggatggcgtgagcctcatgcgggtgctgagcgagaag
gacgtggaccctgtgcgcaccacgtccaacgacatcgtggagatcttcacggtgctgggc
atagaagccgtgcggaaggccctggagcgggagctgtaccacgtcatctccttcgatggt
tcctacgtcaattaccggcacttggctctcctgtgtgataccatgacctgtcgtggccac
ttgatggccatcacccgacacggagtcaaccgccaggataccggacctctcatgaagtgc
tcctttgaggaaacggtggatgtgcttatggaagcagctgcacatggagagagcgacccc
atgaagggggtgtctgagaacatcatgctgggccagctggctccagccggcactggctgt
tttgacctcctgctcgatgcagagaagtgcaagtatggcatggagatccccaccaacatc
cccggcttgggggctgccggacccaccggcatgttcttcggctcggcccccagtcccatg
ggaggaatttctccagccatgacaccctggaaccagggcgcaaccccagcctacggcgcc
tggtcccccagtgttgggagcgggatgaccccgggggcagcaggcttctctcccagtgct
gcttcagatgccagtggcttcagccctggttactccccggcctggtctcccacgccgggt
tccccgggctcccctggcccctcaagcccgtatattccctcaccagggggtgccatgtct
cccagctactccccgacgtcgcctgcctacgagccccgctcccctgggggctacacgccc
cagagtccctcttactcccccacttcaccctcctactcccctacgtctccatcctattct
ccaaccagccccaactacagccccacgtcgcccagctactccccgacctcgcccagctac
tccccgacctcgcccagctactccccgacctcacccagctactccccgacctcgcccagc
tactccccgacctcacccagctactcgcccacttccccaagctactcgcccacatcaccc
agctactcgccaacctctcccagctattcgcccacctctcccagttactcgccaacttca
cccagctactcgcccacctcacctagctactctccgacatctccaagctattcgccgacg
tcaccaagctactcaccaacttccccaagttactcgcccaccagccctaactattctcca
accagtcccaattacaccccgacgtcacccagctatagcccaacatcccccagctactca
cctactagtcccaactacacaccaacgagccccaactacagcccaacctctccaagctac
tctccgacctcacccagctactccccgacctcaccaagctactccccttcgagtccacga
tacacaccacagtctcccacctacaccccgagctcacccagctacagccccagctcgccc
agctacagcccgacttcaccgaagtacaccccaaccagtccttcctacagccccagctca
ccggagtacaccccgacctctcccaagtactcacctaccagcccgaaatattcgcccacc
tcccccaagtactctccgaccagccccacctactcgcccaccactccaaaatactcgccg
acgtctcctacttactcaccaacctctccggtctacaccccaacctcccccaagtactca
cccaccagccccacctactcgcccacctcccccaagtactcacccaccagccccacctac
tcgcccacttcccccaaaggctcgacctactcgcccacctcccctggctactcgcccacc
agccccacctatagcctcaccagcccagccatcagtcccgatgacagtgatgaggagaac
tga
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integrated database retrieval system
