Delphinus delphis (saddleback dolphin): 132424499
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Entry
132424499 CDS
T11117
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04151
PI3K-Akt signaling pathway
ddp04510
Focal adhesion
ddp04512
ECM-receptor interaction
ddp04518
Integrin signaling
ddp04820
Cytoskeleton in muscle cells
ddp04974
Protein digestion and absorption
ddp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132424499 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132424499 (COL6A1)
04518 Integrin signaling
132424499 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132424499 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132424499 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132424499 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132424499 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddp04147
]
132424499 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
ddp00536
]
132424499 (COL6A1)
Exosome [BR:
ddp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132424499 (COL6A1)
Glycosaminoglycan binding proteins [BR:
ddp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132424499 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
132424499 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
132424499
NCBI-ProteinID:
XP_059866184
LinkDB
All DBs
Position
4:complement(665161..685674)
Genome browser
AA seq
1027 aa
AA seq
DB search
MSLPRVLLALLLQACWATAQDDAAASRAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKAFTKRFIDNLNDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDALKSSVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGVRVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEAVISQTIDTITDMIK
NNVEQVCCSFECQPARGPPGLRGDPGYEGERGKPGLPGEKGDAGDPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGVDGVDGMKGETGYPGLPGCKGSPGFDGIQGPLGP
KGDAGAFGLKGGKGEPGADGEPGRPGNTGPPGDEGEPGAPGPLGEKGEAGDEGNAGPDGP
PGERGGPGERGPRGTPGARGPRGDLGEAGPQGDQGREGPIGIPGDPGEAGPTGPKGYRGD
EGPPGPEGPGGASGPPGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDISPRGAKGAKGYRGPEGPPGPPGHIGPPGPDECEILDII
MKMCSCCECQCGPIDILFVLDSSESIGLQNFEISKDFIVKVIDRLSRDELVKFEPGQSHA
GVVQYSHNQMQEHVDLRDPNIRTAQDLKEAIKKLRWMGGGTFTGEALQYTRDRLLPPTQN
NRIALVLTDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDVFGLAAGSDQLNVISCQGLAPQ
GRPGISLVKENYAELLDDGFLKNVTAQICIDKKCPDYTCPITFSSPTDITILLDGSASVG
SHNFDTSKRFAKRLAERFLTAGQTGQGQEVRVAVVQYSGTGQQRPERAALQFVQNYTVLA
SALDTMDFFNDATDVTDALGYVTRFYREASPGATKKRLLLFSDGNSQGATAATIEKAVQE
AQRAGIEIFMVVVGPQVNEPHVRVLVTGKAAEYDVAFGERHLFRVPSYQALLRGVFYQTV
SRKVALG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgccccgtgttctgctcgccctgctgctgcaggcctgctgggccaccgcgcag
gacgatgcggcagcctcgagggccatcgccttccaagactgccccgtggacctgtttttc
gtgctggacacctctgagagcgtggcgttgaggcttaagccctacggggctctggtggac
aaggtcaaggccttcaccaagcgcttcatcgacaacctgaacgacaggtactaccgctgt
gaccgcaacctggtgtggaacgcgggcgcgctgcactacagcgacgaggtggagatcatc
cgcgggctcacgcgcatgcccagcggccgggacgcgctcaagagcagcgtggacgcggtc
aagtacttcggcaaaggcacctacacggactgcgccatcaagaaggggctggaggagctg
ctcgtggggggctcccacctgaaggagaacaagtacctgatcgtggtgactgatgggcac
ccgctggagggctacaaggagccgtgcgggggcctggaagatgctgtgaacgaggccaag
cacctgggcgtcagagtcttctctgtggccatcacgcccgaccacctggagccacgtctg
agcatcatcgccacggaccacacgtacaggcgcaacttcacggcggccgactgggggcag
agccgcgacgcggaggccgtcatcagccagaccatcgacaccatcacggacatgatcaaa
aataacgtggagcaagtgtgctgctccttcgagtgccagcccgccagaggacctcctggg
ctgcggggcgaccccgggtatgagggagaaagagggaagccagggctcccgggagagaaa
ggagacgccggagaccccggaaggcctggggacctcggacccgtcggctaccagggcatg
aagggagaaaaagggagccgaggggagaagggctccaggggacccaagggctacaagggc
gagaaggggaagcgtggcgtggacggcgtggatggcatgaagggggagacggggtaccct
ggcctgccaggctgcaagggctcgcccggattcgatggcatccaaggaccccttgggccc
aagggcgacgcgggtgccttcggactgaaaggagggaagggtgagcctggagcagacggg
gagcctgggaggccagggaacacggggccccccggagacgagggtgagcctggagcacct
ggtcccctgggagagaagggagaagccggcgacgagggaaacgcgggaccagacggaccc
cccggagagaggggcggccctggggaaagaggaccacgggggaccccaggcgcgcggggc
ccgagaggagacctgggtgaagctggaccccaaggtgaccagggacgagaaggccccatt
ggcatccccggagacccgggtgaggctggccccactggaccgaaaggataccgcggcgac
gaggggcctccagggcccgagggccccggaggagcctcagggcccccaggaccccccgga
gaccccgggctgatgggcgaaaggggtgaagacggcccccctggaaatggcaccgagggc
ttccccggcttccctggctatccgggcagcaggggtcctcccgggataaatggcaccaaa
ggctaccctggcctcaagggagacgagggagaagccggggaccctggagaggacaacaat
gacatttctccccgaggcgccaaaggagcaaagggctaccgaggccccgaaggccccccg
ggacccccaggacacataggaccaccagggccagacgaatgcgagattttggacatcatc
atgaaaatgtgctcttgctgtgagtgccagtgcggccccatcgacatcctgttcgtgctg
gacagctccgagagcatcggcctgcagaacttcgagatctccaaggacttcatcgtcaag
gtcatcgaccggctgagcagggacgagctggtcaagtttgagcccgggcagtcgcacgcg
ggcgtggtgcagtacagccacaaccagatgcaggagcacgtggacctgcgggaccccaac
atcaggaccgcccaggacctcaaggaagccatcaagaagctgcgctggatgggcggaggc
accttcacaggcgaggctctgcagtacacccgggaccggctgctgccgcccacccagaac
aaccgcatcgccctggtcctcacggacggccgctcggacacccagagggacaccacccca
ctcagcgtgctctgcggccctgacattcaggtggtctccgtgggcatcaaggatgtgttt
ggcctagccgcgggctccgaccagctcaacgtcatctcctgccaaggcctggcgccccag
gggcggccgggcatctcgctggtcaaggagaattacgcagagctgctggacgatggcttc
ctgaagaacgtcaccgcccagatctgcatagacaagaaatgtccagattacacctgccca
atcaccttctcctccccgaccgacatcaccatcctgctggacggctcggccagcgtgggc
agccacaacttcgacacctccaagcgcttcgccaagcggctggccgagcgcttcctgacg
gcgggccagacgggccagggccaggaggtgcgcgtggcggtggtgcagtacagcggcacc
gggcagcagcggccggagcgtgcggcgctgcagttcgtgcagaactacaccgtgctggcc
agcgccctggacaccatggacttcttcaacgatgccaccgacgtcaccgacgccctgggc
tacgtgacccgcttctaccgcgaggcctcgcccggcgccaccaagaagaggctgctgctc
ttctccgacggcaactcgcagggcgccacggcggccaccatcgagaaggccgtgcaggag
gcccagcgggcaggcatcgagatcttcatggtggtggtgggcccccaggtgaacgagccc
cacgtgcgcgtcctggtcaccggcaaggcggccgagtacgacgtggccttcggtgaacgc
cacctgttccgcgtgcccagctaccaggcgctgctgcgcggcgtcttctaccagacggtg
tccaggaaggtggcgctgggctag
DBGET
integrated database retrieval system
