Delphinus delphis (saddleback dolphin): 132425100
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Entry
132425100 CDS
T11117
Symbol
COL6A5
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(VI) chain
KO
K06238
collagen type VI alpha
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04151
PI3K-Akt signaling pathway
ddp04510
Focal adhesion
ddp04512
ECM-receptor interaction
ddp04518
Integrin signaling
ddp04820
Cytoskeleton in muscle cells
ddp04974
Protein digestion and absorption
ddp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132425100 (COL6A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132425100 (COL6A5)
04518 Integrin signaling
132425100 (COL6A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132425100 (COL6A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132425100 (COL6A5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132425100 (COL6A5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132425100 (COL6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddp04147
]
132425100 (COL6A5)
00536 Glycosaminoglycan binding proteins [BR:
ddp00536
]
132425100 (COL6A5)
Exosome [BR:
ddp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132425100 (COL6A5)
Glycosaminoglycan binding proteins [BR:
ddp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132425100 (COL6A5)
Hyaluronan
Extracellular matrix or blood plasma proteins
132425100 (COL6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Copine
VWA_CoxE
Integrin_beta
Leptin
Motif
Other DBs
NCBI-GeneID:
132425100
NCBI-ProteinID:
XP_059867463
LinkDB
All DBs
Position
4:complement(132547244..132702211)
Genome browser
AA seq
2518 aa
AA seq
DB search
MKILLIVFVLILWTETLTYQSPGPGPEYADVVFLVDSSNYLGIKSFPFVKTFINKMISSL
PIEAHKYRVGLAQYSNVLHREFQLNTFKSRGPMLNHLKKNFRFLGGSLRIGNALREVHMT
YFSNGRDKRQFPPILVVLASAESEDAVEEASKALHSDGVRIISVGLQGTPEETLKAMATG
QFHYSLQTVQDLSMFSQNMTQILKDAAQYKEVAAHSHTVVPFPRTCQKDSLADLMFLVDE
SVGTKQNLRNLQNFLKNITSSMDVKDKCLRLGLMSYSDRVQTFSPLSSSTTQSEFQKQIQ
KLSLRAGKSSAGAAIEKMRREGFSASSGSRRAQGVPQIAVLVTDRPSDDKVREAALNLRL
EDVTVFAMGIQGANKTQLEEIASYPPGQTISMMKSYADLEIYSKKFLKKLQNQIWSQIST
HAEQMELDKTGCVDTKEADLYFLIDGSSSIQNKHFEQIKEFMLAVIEMFSIGPDKVRVGA
VQYSHKKEVEFDINDYPNAVALRKAVSNIKQLGGRTLTGAALDFILPLIRKGRKQRMNEV
PCYLIVLTDGKFTDGVLEPAERLRAEHITIHMVGIGEANRTQLQQIAGAEERVHFGQNFD
SLKRIKNEVVRSICTEKGCEYMKVDIMFLVDGSGSIGYENFGKMKTFMKNLLAKVQIGPD
KTRVGVIQFSDHNREEFHLDKYYTQKEISDAINRMSPINKNTLTGSALTFVDPYFTEPKG
GRSMVKKFLILITDGEAQDDVIDPAKALRDKGVVIFSVGVYGANRSQLEEISGDGSLVFQ
VENFDDLKTIESKLIFHVCALHDCKRIRQLDVVFVLDHSGSILPQDQESMINVIIHLVKK
SDVGPDRVQFGALRYSDHPEVLFYLNTYSNRAAIIEHLRRPRDTKGNTFTARALQHANNL
FMEEHGSRLKQNVKQMLIIITDGVSHDRDQLSDAASKLRAKGIIIYAVGVGKADQEELET
MAGNKNYTIHISNFNKLKDIYLPLQDSMCTNAQEVCNIQEADVIFFCDGSDMVSDSDFVT
MTTFLSDLIDNFDIQSQRMKIGIAQFGSRYQEIIELQNSLTKTQWKSRIQTMTKSNGLPR
MDLALKQVSVMFEQSAGGRRKAGVPQTLVVITSGGPRYDVTEAVKTLREEGICILALGIG
NVYKEELLSITGNSEKIITFKDFDKLKNVDVKKRMVREICQSCGKTNCFLDIVVSFDIST
HLMGQPLFHGHPQLESYLPGILEDITSLRGVSCGAGTEVQVSMAFKVNSDQNFPTKFQIY
QETIFDSLLQVTVNGPTHLNAQFMQSMWDTFNDTSASRGQVLLIFSDGLGSESKIMLEDT
SDRLREAGLDALLVVSLNSTSHDEFSSFEFGKGFDYRIHLTIGMKELGNMLSQYLGNIAE
RTCCCTFCKCSQTPGPQGIRGPQALKGLPGLKGSRGHRGEEGDPGRQGDTGPQGNRGIEG
CPGERGQKGAKGFAGYKGEHGDDGIDGLYGEEGFHGLPGKKGEKGDPGSQGSPGSRGPPG
GYGEKGFPGDPGNPGQSNNIKGQKGSKGNQGRQGRTGPKGTQGSPGSRGSSEREGQRGVQ
GASGEPGNPGLKGASGAEGLQGSQGSNGLRGRKGEKGNEGHKGPQGAPGPVGDKGSVGRP
GLLGKKGEPGIPGDPGPLGQAGRQGKQGDYGIPGYGPMGRKGVKGQRGFLGDMGQKGVVG
DPGIPGGPGPKGFRGLTLTVGLKGEEGSQGRQGPPGRRGPKGMAGQRVYSQCDLIQFMQD
HSPCWKEKCPVYPTELVFALDQSYDITEQRFNETRDIIISIVNDLHIRENNCPVGARVVV
VSFDLDTNYLIRGSDYHSKKQLLQLLSQIKYQNSGEVRDIGNSMKFVARNIFKRMLAGAN
VQRVAVFFSNGQSASRSSIITATMEFSALDISPAVFAFNERVSLEEAFEFDNTGTFQVLP
VPPNGEYEPLERLRHCTLCYDKCFPNTCKKQIFLPENSYMDVAFLLDNSRNIASDEFKDV
KALVSSMLDNFDIASDPVTSDSGDRIALLSYSPWDGRKKDAVKTEFEFTTYDNQALMKRH
IQTYLQQLNGESTIGRALLWAVEYLFPGTPRLRKHRVIFVVSAGGNHERKEFLKKMALRA
KCQGYVIFVISLGSTHKEDMEELASHPLDHHLIQLGRIHKPNLDYAVKFLKPFVYSVRRG
FNQYPPLMLENICRLINSKEEDNQSINLLFTPEQQDISSGENSFIGQEFSVGRDSSFVLE
DSGSDHLAYIPSQMFMPQKLTTKYEKDQDSEKIASLTAGQESHGRKEEPGLTYELRDVSL
QEYYMDVAFLIDASQRIGNDEFQEVKAFITSVLDYFHLAPDPLISTLGDRVAVLTYSPPG
YMPNTEESPIYLEFDLVTYNNIHQMKHHLQDSLQQLNGDVFIGHALQWTIDNVFVGTPNL
RKNKVIFVISAGETNPLDRGVLRNVSLRAKCQGYSIFVFSFGPLHNDKELEELASHPLDH
HLVQLGRTHKPDLNYVVKFVKPFVHSIRRAINKYPPADMRPKCXSPNPENGGTENTVL
NT seq
7557 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgttaattgtatttgttctcatcctttggactgaaacactgacatatcag
agcccagggccaggccctgagtatgccgacgtggtgtttctggtggatagctccaactac
ctgggaattaaatccttcccatttgtgaagacattcatcaacaagatgatcagcagcctc
cccatagaggcccataagtatcgtgtgggcctggcccagtacagcaacgtgctccacaga
gaattccagctcaacaccttcaagagcagaggccccatgttgaaccacctcaagaagaac
ttcaggttcctgggcggttccctgcggattgggaatgcactccgggaggtgcacatgacc
tacttctcaaacgggagggacaagagacagtttcctccaatcctggtggtcttggcttca
gctgagtccgaggatgccgtggaagaggcctccaaggcgttgcacagtgacggggtgagg
attatctcagtggggttgcaggggacacctgaggagactctgaaggccatggccacaggc
caattccactacagcctccagacggtccaagatctcagcatgttctcccaaaacatgacg
cagattctcaaggatgcggctcagtacaaggaggtagcagcccactctcatacagtagtc
cccttccccaggacctgtcagaaagattcgcttgccgacctcatgttcctggtggatgag
tctgttgggacaaaacagaatctaaggaacctgcagaacttcctgaagaatatcacctcc
tccatggatgtgaaagacaaatgcctgcggcttggtcttatgagttacagtgacagagtt
cagactttttctcctctgagctcaagcacaacccaatctgaatttcagaagcaaatccag
aagctttctctgcgggctgggaaatccagtgctggtgctgccattgagaagatgaggaga
gaaggcttctcagcatcaagtggcagcagaagggcacagggagtgccccagattgcagtc
ctggtcactgacagaccatcagatgacaaggtgcgtgaggctgcactgaatctccgcctg
gaggatgtaactgtgtttgccatgggcatccaaggggccaacaagacccagttagaagaa
atagcatcttatcctccgggacagaccatctccatgatgaagtcctatgcagacttggaa
atttacagtaagaagttcttgaaaaagctccagaatcaaatatggtcccaaatttcaact
catgctgaacaaatggaacttgataaaactggctgtgtagatacaaaagaagcagatctc
tatttcctcattgatggctcaagcagcattcagaataaacactttgagcaaatcaaggaa
tttatgttggcggtgatagagatgtttagcatcggcccagacaaagtccgagttggagct
gtgcagtattcccacaagaaggaagtggaatttgatatcaatgactatcctaatgctgtg
gcattaagaaaggctgtttctaacatcaagcaacttggaggcagaactcttactggggca
gccctggatttcattctgccactaataaggaagggaaggaagcagaggatgaatgaggta
ccctgttacctcattgtgttgactgatgggaagttcacggatggtgtcctggaacctgct
gagagactaagggctgaacacatcaccatccacatggtcggcattggtgaggctaacaga
acacaactgcaacaaattgctggggcagaggaaagggttcactttgggcagaactttgat
tctttaaaaagaatcaaaaatgaagttgttcgcagcatctgcactgagaaaggatgtgaa
tacatgaaggtcgatatcatgtttctggtggatggttctggcagtataggatatgaaaat
tttgggaaaatgaaaaccttcatgaaaaacctgttagctaaggttcagattggcccagac
aaaacccgagttggtgtcattcaattcagtgatcataatagggaagaattccatcttgat
aaatactatacacaaaaagaaatttctgatgcaataaacagaatgtctcccatcaacaaa
aacactttgactggaagtgcactaacctttgtggatccatacttcactgagcccaagggg
ggccgttcaatggtcaaaaagtttctcatcctcatcactgatggagaagcccaagatgat
gtgatagaccctgcaaaagctcttcgggacaaaggtgtggtcatcttctctgtgggggtg
tatggggccaatagatctcagctggaggagatcagtggggacggcagcctggtcttccaa
gttgagaacttcgatgatctaaagacaatagagagtaaactcatcttccacgtgtgtgct
cttcatgattgtaaaaggattagacagttagacgttgtgtttgtgctggaccattcaggc
agcatcctgccccaagaccaagaaagcatgatcaatgtcattatccatttggtgaagaaa
tcggatgttggcccggacagagttcagtttggagcgctcagatactcagatcatcctgag
gttctcttctacctcaatacgtactcaaacagagcagccatcatcgagcatctgaggagg
cccagggatacgaaagggaataccttcactgccagggctctgcagcatgcaaacaacctg
ttcatggaggaacatggcagccgtctcaagcaaaacgtgaagcagatgctgatcatcatc
acagatggggtatcccatgaccgagatcagctcagtgacgcggcttcaaaattaagagcc
aaaggcatcatcatctatgcagtgggtgtaggaaaggccgaccaagaagaactggagact
atggcggggaataaaaactatactatccacatcagtaatttcaacaaactgaaagatatt
tacctgcctctgcaagatagtatgtgtaccaatgcacaagaggtctgtaacattcaagaa
gccgatgtgattttcttttgtgatggctctgacatggtatctgattcagactttgttacc
atgacaactttcttgtcagacttaattgataattttgacattcagtctcaaaggatgaaa
attgggatagcacaatttgggagccgctaccaagaaattattgagttgcaaaactctctg
actaaaacccagtggaagtctcgaattcaaactatgacgaagagcaacgggcttccgcga
atggacttggcactgaaacaagtgagcgttatgtttgagcaatctgctggtgggagaagg
aaggctggtgtccctcagactttggtggttatcacatctgggggtccccgctatgatgtg
acagaggcagtgaagaccctgagagaagaaggcatttgcattctggctttgggcatagga
aatgtttataaggaagagctcttgtcgataacaggcaattctgaaaaaatcatcactttt
aaagactttgataaactaaagaatgtggatgtgaaaaaaagaatggtccgtgaaatctgc
cagagctgcgggaaaaccaactgctttctggacatagtggtcagcttcgacatttccact
cacctgatggggcagccattattccatggccacccccagctggaatcatacctcccaggc
atcttagaggacattacctccctcaggggtgtgagctgcggggcaggcacagaggtacag
gtgagcatggcctttaaggtgaacagtgaccagaatttccccaccaagttccaaatctac
caggaaacaatatttgacagcctactgcaagtcaccgtcaacgggccaactcacctgaat
gcacagttcatgcagtccatgtgggacacgtttaacgatacgtctgcatcccgaggacag
gtattactcatcttttcagatggtcttgggagtgaaagcaaaataatgcttgaagataca
tcggacaggctcagagaagcaggacttgacgctttgctggtggtttccctaaactcaacc
tctcatgatgagttttccagctttgaatttggaaaaggatttgattacaggattcacctg
accattggaatgaaagaattgggcaatatgttatcacagtatctgggaaacattgcagag
aggacttgctgctgtacgttttgcaaatgttcacagactccaggacctcaagggatccga
ggaccacaagccttaaagggtcttccaggtctgaaaggcagcagaggacacaggggagag
gagggagaccctggaagacaaggagacactggaccccaaggaaatagagggattgaagga
tgtccaggggagcggggtcaaaagggagccaaaggatttgctggatataagggagaacat
ggagacgatgggattgatggactctatggggaagagggctttcatggacttcctgggaaa
aagggagaaaagggtgatccagggtcccagggcagcccaggttccagaggccctcctggg
ggatacggggagaagggcttcccaggggatcctggtaatccaggacaaagcaataacatc
aaaggacaaaagggctccaaaggaaaccaaggaagacaaggtagaaccggcccgaagggg
acacaaggcagtcctggttccagagggagcagtgaaagagaaggccagaggggggtccag
ggtgcctcgggggaaccagggaaccctggacttaaaggtgcatcaggagccgaaggatta
caaggctcacaggggtcaaatggacttcgcggcaggaaaggagagaagggaaacgagggg
cacaaaggacctcagggtgctcctgggccagtgggagataaagggagtgttggaaggcct
ggacttttggggaaaaagggagaacctggaattcctggagatccagggccactggggcaa
gctggacggcaaggaaagcaaggtgattatggcattccgggctatggtcctatgggacga
aaaggagtaaagggccaaagaggattccttggagatatgggtcaaaagggtgttgttggt
gatcctggaattcctggggggcctggacccaaaggatttaggggactaacactcactgta
ggtttgaaaggtgaggaaggctctcaaggacgtcaaggccctcctggacggagaggccct
aaaggcatggcagggcagcgggtatattctcaatgtgatctaatccagttcatgcaggac
catagtccttgttggaaagaaaagtgtccagtgtatccaacagagctagtatttgccctg
gaccagtcctacgatatcacagagcagagatttaatgaaacgagggacatcatcatttct
attgtcaatgaccttcacatcagggaaaataattgccctgtgggagcaagagttgtcgtg
gtttccttcgacttagacaccaactacctcatccgtgggtctgactaccatagtaagaag
caactcctccagcttctttcccaaattaaatatcaaaactccggagaagtccgagacatt
ggtaactcgatgaagtttgtggctcggaacatcttcaagcggatgttagcaggagccaat
gtgcagagagtcgctgtgttttttagcaatggacaatctgccagtaggtcatccatcatc
acggccaccatggagtttagtgccttggatatcagccctgcagtctttgcttttaatgaa
agagtttcccttgaggaggcttttgagtttgacaacacgggaacatttcaggtgcttcct
gttcctccaaatggggaatatgaaccattagaaagacttcggcactgtactctttgctat
gataaatgctttccaaatacttgcaagaaacagattttcttacctgaaaattcatacatg
gatgtcgccttcctcttagacaattctaggaatatagcaagtgatgagtttaaggatgtc
aaagccttggtaagctcaatgcttgacaactttgatattgcctcagaccctgtaacctca
gactctggtgataggattgccttgttgagctactctccttgggatgggaggaagaaagat
gcggtaaaaacagagtttgagtttacaacttatgacaatcaagctctaatgaagaggcac
atccagacttacctccaacaactaaatggagaatccaccattggccgtgccctactgtgg
gctgtggagtatctcttcccaggaacacccagactgagaaaacatagagtcatctttgta
gtctctgctggaggaaatcatgagagaaaggaattcttaaagaagatggctctgagggcc
aagtgtcaaggctatgtcatatttgtgatttctctgggctctacacataaggaggacatg
gaggagctagccagccacccacttgatcaccatctgatacagcttgggagaattcataaa
ccaaacctggattacgctgtgaagtttttaaagccatttgtgtactcagttagacgagga
ttcaatcagtacccaccactgatgcttgagaatatctgcagactcatcaattcaaaggaa
gaggataatcaaagtatcaatctcctatttacccctgagcaacaagatatttcttcagga
gagaacagcttcattggccaagaatttagtgtgggcagagattcatcttttgtgttggaa
gacagtggaagtgaccatctggcttacattccaagccaaatgtttatgccacagaaatta
acaactaaatatgaaaaagatcaggattctgaaaaaattgcaagtctcactgctggacag
gaaagccatggcagaaaagaagaaccaggtcttacttatgaactcagagatgtctctctt
caagaatattacatggatgtggcttttctcatagatgcttcccaaagaataggaaatgat
gagtttcaggaagtgaaagcttttataacctcagtgcttgattactttcacttggcccca
gatccactgatctccaccttgggagacagagtggcagtcctgacctactctcctccaggc
tatatgcccaacacagaagaaagccccatctacctagaatttgatttggttacttataac
aatatacaccaaatgaaacatcatctccaagactcccttcaacagctcaatggagatgtt
tttattggccatgccctacagtggacaattgacaatgtctttgtaggaacccccaacctg
aggaaaaacaaagttatctttgttatatctgctggtgaaaccaaccctttagacagggga
gtcttaagaaatgtatctctgagagccaagtgtcagggctactccatatttgtgttttcc
tttggtcctctacacaatgacaaggaattagaagaattagccagccacccactggatcat
cacttagtccagcttggccgaacccacaagccagatttgaactatgtcgtcaaatttgtc
aagccatttgttcattcaatcagacgtgccatcaacaaatatccccctgcagatatgaga
cccaaatgtngttctcccaacccagagaatggtggcacagaaaacactgtattgtga
DBGET
integrated database retrieval system
