KEGG   Dickeya dianthicola: DDI_2909
Entry
DDI_2909          CDS       T05141                                 
Name
(GenBank) putative RND efflux membrane fusion protein
  KO
K07799  membrane fusion protein, multidrug efflux system
Organism
ddq  Dickeya dianthicola
Pathway
ddq02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DDI_2909
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ddq02000]
    DDI_2909
Transporters [BR:ddq02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   DDI_2909
SSDB
Motif
Pfam: Beta-barrel_RND RND-MFP_C BSH_RND HH_MFP_RND YknX_C BSH_CzcB CzcB_C BSH_YhbJ HH_EMRA Beta-barrel_RND_2 Biotin_lipoyl BSH_CusB BSH_YknX VWA_3_C HH_YBHG
Other DBs
NCBI-ProteinID: ATO34077
LinkDB
Position
3007435..3008676
AA seq 413 aa
MNAARLFRFLILIVVIAAALFAWRYFRPSQSESTNGATTTQQAASQGQGRSGGRRGSTAP
PPVQAALSSSSSVPYYLSGLGTVTAANTVTVHSRVSGQLMAIHFQEGQQVSEGELLAEID
PRPFVVALTQAQGQQAKDQALLVNARQDLVRYQQLSKTSLVSGQQLDTQESLVRQYEATV
KSDQGSVASAQLQLDYSRITAPFSGRVGLRQIDIGNYVTSTDNLLVLTQTHPIDAVFTVP
ESDIATVLKAQKSGQPVLVEAWDRANQHILSQGRLLSMDNQIDATTGTLKLKARFDNADD
ALFPNQFVNIKMKVDTLQNVVVAPSAAIQMGNEGHFVWVLNDKDQVSKHLVATGIQYGQQ
TVVSTGLNAGERVVTDGIDRLTEGARVEVLAPATADAKSAAGTEKRQHKAEKS
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgaacgccgcacgcttatttcgttttctgatcctcattgttgttattgccgcggcgttg
ttcgcctggcgttattttcgcccatcacaatcagaatccaccaacggagcgaccaccaca
cagcaagccgcttctcagggacaaggccgcagcggcgggcgccgcggttctaccgctccg
ccgccggtacaggccgcactctcttcttcatcctcggtgccttattacctgtcgggtttg
ggcacggttaccgccgccaacaccgtcacggtacatagccgggtcagcggccagttgatg
gcaatccactttcaggaagggcaacaggttagcgaaggcgaattgctggcggaaatcgat
ccgcgcccgtttgtagtagcgctgacgcaggcgcaggggcaacaggccaaagatcaggcg
ttgctggttaatgcccgtcaggatttggtccgctaccagcaactgtccaaaaccagtctg
gtttccggccagcagttggatacccaggaatcgctggtgcgccagtatgaagcaacagtg
aaatcggatcagggttcggtcgccagcgcgcagttacagctggattacagccgcatcacc
gcgccgtttagcggccgcgtcggcctgcgccagattgacatcggcaactacgtcaccagc
accgataatctgctggtgctgacgcaaacccacccgatcgacgccgttttcaccgtgccg
gaaagcgatatcgccaccgtgctgaaagcgcagaaatccggtcagccggtactggtggaa
gcctgggatcgcgccaatcagcacatcctctctcagggccgcctgctgagcatggataac
cagatcgacgccaccaccggcaccctcaagctgaaagcccgcttcgacaacgccgacgat
gcgctgttccccaatcagttcgtcaatatcaagatgaaagtggataccctgcaaaatgtg
gtggtggcgccgtcggccgcgatccagatgggtaacgaagggcactttgtgtgggtactg
aacgacaaggatcaggtcagcaagcacctcgtcgccaccggtattcagtacggccagcaa
accgtggtttcgaccgggttgaacgccggcgaacgggtggtcaccgacgggatcgatcgc
ctgaccgaaggcgcgcgcgttgaagtgttggcgcccgcgacggcggatgccaaatccgcc
gccggcacggaaaaacgtcagcataaagcggagaaatcctga

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