Dickeya dianthicola: DDI_3017
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Entry
DDI_3017 CDS
T05141
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00040
Pentose and glucuronate interconversions
ddq01100
Metabolic pathways
ddq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DDI_3017
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDI_3017
Enzymes [BR:
ddq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DDI_3017
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ATO34185
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Position
3118302..3119516
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AA seq
404 aa
AA seq
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MNNSRMSSVSTQKTTGRSTLGTQSALAAIIATTMMVSAASAASLQTTKATEAASTGWATQ
TTGTTGGAKATSAKIYAVKSISEFKTALNGTDSSPKIIQITGTIDISGGKAYTSFDDQKA
RSQISIPSNTTIIGIGSNGKFTNGSLVVKGVSNVILRNLYIETPVDVAPHYEDGDGWNAE
WDAVVIDSTDHVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKRGSDYVTISNSRF
ELHDKTILIGHSDNNGSQDAGKLRVTFHNNLFDRVGERTPRVRFGSVHAYNNVYVGDVNH
KAYRYQYSFGIGTSGSLLSESNAFTIDNLKKISGRDKECSVVKAFNGKIFSDKGSIINGA
SYNLNGCDFGFSAYSAKIPYKYSAQTITTSLASSISNNAGYGKL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactcacgtatgtcttccgtttcaacacagaaaacaacaggacgttctaccctg
ggaacccaaagcgcgctggcggcgattatcgccaccaccatgatggtttctgccgcttcc
gccgccagtctgcaaaccaccaaggcgacagaagcagcctcaaccggctgggcgacacag
accaccggcaccaccggcggcgccaaagcaacctcagctaaaatctacgcggtgaaaagc
atcagcgaattcaaaacggcgctgaacggaaccgattcgtcgcccaagatcatccagatc
accggaacaattgatatcagcggcggcaaagcctacaccagctttgacgatcagaaagcc
cgcagccaaatcagcattccgtccaacaccaccatcatcggtattggcagcaacggcaaa
tttaccaacggttcgctggtggtgaagggcgtgagcaacgttatcctgcgtaacctgtat
atcgaaacgccggtggacgtggcgccacattacgaagacggggatggctggaacgccgag
tgggacgcggtagtgattgacagcacagaccacgtctgggttgaccatgtcaccatcagc
gacggcagcttcaccgacgataaatacaccaccaaagatggcgaaaaatatgtgcagcat
gacggcgcattggatatcaagcgcggctctgactatgtcaccatttccaatagccgcttc
gagctgcacgacaaaaccatcctgatcggccacagcgacaacaatggttcgcaagacgcc
ggcaaactgcgcgtcaccttccacaacaacctgtttgaccgggtcggcgaacgcacccca
cgcgtccgctttggtagcgtccacgcttacaacaacgtttacgttggcgacgtcaaccac
aaagcctaccgctatcagtacagcttcggtatcggcaccagcggcagcctgctgtctgaa
tccaacgcgtttaccattgataaccttaagaagatcagcggccgcgacaaggaatgcagc
gtggtcaaagcgtttaacggcaagatcttctccgataaaggctcgatcatcaacggcgcg
tcgtacaatctgaatggttgcgactttggcttcagcgcatatagcgccaagatcccgtac
aaatactcagcccagacgattaccaccagtctggctagcagcatcagcaacaatgcgggc
tacggcaaactgtaa
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