Dehalobacter sp. DCA: DHBDCA_p2974
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Entry
DHBDCA_p2974 CDS
T02278
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ded
Dehalobacter sp. DCA
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ded03016
]
DHBDCA_p2974 (gidA)
03036 Chromosome and associated proteins [BR:
ded03036
]
DHBDCA_p2974 (gidA)
Transfer RNA biogenesis [BR:
ded03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
DHBDCA_p2974 (gidA)
Prokaryotic type
DHBDCA_p2974 (gidA)
Chromosome and associated proteins [BR:
ded03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
DHBDCA_p2974 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
Pyr_redox
AlaDh_PNT_C
ThiF
DAO
HI0933_like
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AFV04001
LinkDB
All DBs
Position
complement(3063990..3065897)
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AA seq
635 aa
AA seq
DB search
MDYFAGKYDVIVVGAGHAGCEAALASARMGCDTLLLTINLDKVAHMPCNPSVGGPAKGHL
VREIDALGGQMGIVADETALQARLLNTGKGPAVHALRVQSDKKAYHHRMLSNLYNQAKLT
LIQALVERLHFDGDKLKGVVTRTGAVFEAGSIVLTGGTYLRSRIIIGEALYEGGPAGEIT
SGSLSEDLKLRGIELGRFKTGTPPRILKSSVDFSKFVIQPGDSEPKNFSFMPTKSMFWGN
NPENQLPCWLGYTTETTHGIIRDNLHRAPLYTGVVEGVGPRYCPSIEDKVVRFAQRQAHQ
LFLEPEGKDSEELYVAGLSTSLPEEIQHMFFRSIPGLENVQILRPGYAIEYDYVKPYQLS
LTLEVRNLPGLFTAGQLNGTSGYEEAAGQGLMAGINAALKALRREPFILKRSDGYLGVLI
DDLVNKEICEPYRLLTSRAEYRLLLRQDNADLRLTEKGRKLGLVADDRWKIFEQKLNNLE
KIFQQWKTITFSPASADIQELLIQAGSTPLRSGIKAEELVKRPEIIPDLLPRFMPEMGAY
DAEVLEEASIQIKYEGYIQKQQEEVNRFIKLEEKVLPVNLDYLKIKGLSNEARQRLNGVQ
PINVGQASRISGVSPADISVLLIYLEQRRRNISNE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gtggattattttgctggaaaatatgatgtgattgttgtcggggcgggacatgccggatgt
gaggctgctctcgcctctgcccgtatgggatgcgatacactgctgcttacgattaattta
gataaagttgcgcatatgccgtgcaatccgtccgtaggcggtccggcgaaaggccatctg
gtgcgggagattgatgcgctaggtggtcagatgggaattgttgccgatgagacagcactt
caggccaggctgctgaatacgggcaaagggccggctgtccatgcactaagagttcaatca
gataaaaaagcttatcaccatcggatgttaagcaacctatacaatcaggccaagcttacc
ttgatacaggctttggtcgagcggctccattttgatggggataaacttaaaggtgttgtc
acgcgtacaggcgcagtctttgaggcaggcagtattgttctgacgggcggaacatacctc
agaagcaggataataattggggaagcgctttatgaaggcggaccggccggagagatcacc
tcggggtccctgtctgaggatctgaaactacgcggcatagaacttggccggtttaaaacc
ggaacgcctcctcggattctgaagagctcagtagatttctctaagttcgtaattcagccg
ggtgacagcgagccaaaaaatttttcgtttatgccgactaaaagcatgttttggggaaat
aacccggaaaatcagcttccttgctggctgggctacacgacggaaacaacgcatggcatt
atccgcgataacctgcaccgcgcaccgctgtataccggcgtggtggaaggcgttggcccg
aggtattgtccttctattgaagataaggttgtgcgttttgcgcagcggcaggcccatcag
ctttttcttgaaccagaaggcaaagatagtgaggaattatatgttgccgggctgtcaacc
agcctgccggaagaaatccagcatatgttttttcgtagcattcccggtttggaaaatgtt
cagattttgcgtcccggatatgcgattgaatacgattatgtcaaaccgtatcagctctct
ctgacgctggaagtacgaaatctcccgggactctttacagcggggcagcttaacggaaca
tccgggtatgaggaagcggccgggcagggcttaatggccggaatcaacgcagcgcttaaa
gctttacgccgggaaccttttattttgaagcgttccgacggatatctcggtgtactaatt
gatgacctggtaaataaagagatttgtgagccgtacaggcttttgacctcaagggcggaa
taccgtttgctactgcgccaggacaacgctgatctgcgtttgactgagaagggtagaaaa
ctgggactagttgcagatgacaggtggaagatttttgagcagaagctgaacaatctggag
aaaatctttcagcaatggaagacgattactttttctcccgccagtgcggatattcaggaa
ttgctgatccaggcgggttctactccgctccgaagcgggattaaagcagaggaacttgtg
aagaggccggaaattataccggatttgctgccacgttttatgccggagatgggggcgtat
gacgctgaagtattagaagaagcctcaatccaaattaaatacgaagggtacattcagaaa
caacaggaagaagtaaaccgatttatcaaacttgaagaaaaagttctgcctgttaatctg
gattatttgaaaatcaaaggtctatccaatgaagccagacagcggcttaacggcgtgcag
ccgatcaacgtcggacaggcatcgagaatcagcggagtgagtcctgcggatatttcggtt
ttattgatttatctggaacaaaggcggaggaacatttctaatgaatga
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