Pseudodesulfovibrio indicus: AWY79_04315
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Entry
AWY79_04315 CDS
T04404
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dej
Pseudodesulfovibrio indicus
Pathway
dej03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWY79_04315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dej03400
]
AWY79_04315
Enzymes [BR:
dej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AWY79_04315
DNA repair and recombination proteins [BR:
dej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AWY79_04315
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AMK10394
UniProt:
A0A126QK85
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All DBs
Position
935193..935960
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AA seq
255 aa
AA seq
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MIIYSWNVNGYRAVLKKDFRDWLDGCGGDVVMLQETKAEPDQLDPEDREPDSFSNHYWNW
SKKKKGYSGVACFANPEPLSVSTGLPDVRFRDEGRVLHLEYPDFHLFNIYFPNGQMSDER
LDFKMGFYDCFLDHAETLRKTKPIVVGGDFNTAHREIDLKNPKANAERSGFLPVERAWID
KFIEHGYVDTFRLFEDGPHHYSWWSYRFNARKNNAGWRIDYFFVSEELKDRVTRAWIEPD
VLGSDHCPIGVEIDV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgatcatctactcatggaacgtcaacggctaccgcgccgtgctcaagaaggacttccgc
gactggctcgacggctgcggcggcgacgtggtcatgctccaggagaccaaggccgagccg
gaccagctcgaccccgaggaccgcgagccggactccttctccaaccactactggaactgg
tccaagaaaaagaaaggctactccggcgtggcctgcttcgccaaccccgagccgctctcg
gtctccaccggcctgcccgacgtccggttccgcgacgagggccgcgtgctgcacctcgaa
tacccggacttccacctcttcaacatctatttccccaacggccagatgtccgacgagcgc
ctggacttcaagatggggttctacgactgcttcctggaccacgccgaaaccctgcgcaag
accaagcccatcgtggtcggcggcgacttcaacaccgcccaccgggaaatcgacctcaag
aaccccaaggccaatgccgaacggtccgggttcctgcccgtcgagcgtgcctggatcgac
aaattcatcgaacacggctacgtcgacaccttccggctcttcgaagacggcccccaccac
tactcctggtggtcctaccgcttcaacgcccgcaagaacaacgcgggttggcgcatcgac
tacttcttcgtgtccgaagaactcaaggaccgcgtcacccgcgcctggatcgaacccgac
gtcctcggctccgaccactgccccatcggcgtggaaatcgacgtttag
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