Desulfobulbus oralis: CAY53_04030
Help
Entry
CAY53_04030 CDS
T05339
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
deo
Desulfobulbus oralis
Pathway
deo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAY53_04030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deo03400
]
CAY53_04030
DNA repair and recombination proteins [BR:
deo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAY53_04030
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CAY53_04030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
AAA_16
AAA_21
nSTAND1
DnaJ_CXXCXGXG
AAA_33
AAA_15
RsgA_GTPase
ATPase
APS_kinase
AAA_23
DUF4350
AAA_25
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AVD70753
UniProt:
A0A2L1GM53
LinkDB
All DBs
Position
928203..931031
Genome browser
AA seq
942 aa
AA seq
DB search
MEPQYIRIRGARMHNLKNISVDLPRNRLIVFTGLSGSGKSTLAFDTLYAEGQRRYVESLS
TYARQFLGQMDKPEVDRLDGLSPAVAIEQKTTGRNPRSTVGTVTEIYDYLRLLFARAGQP
HCPQCGAPIRAQSIADMIDLLMAEPEGTKCVLLAPVVRRRKGEHEQVLQKLRREGYVRVR
VDGEMLQLAGDIRLEKTKFHSIEAVIDRVVIRAGLRRRLDESVSTAVKLGSGVMIVLFPD
SGEERLYSESAACHQCGISVPALTPQLFSFNNPQGACPDCDGLGVTRYLDEKLLVPDASL
SIAEGAIRPWYSHKLAPWTVPWMEALSQHYHFEVSTPFERLPERVRQLILYGSGEEKIAL
SRGHGAARRVSQQPFEGLIPRLNRLSRETSSVAMSELADRYMSERECPACKGARLKPEAL
AVRVGPWGIRDMSGMAIERLASELEGLSLEARHAQIAAPVLKEIRQRLRFLKGVGLGYLT
LARSAGTLSGGEAQRIRLASQIGSGLAGVLYILDEPSIGLHQRDNHKLIKTLVSLRDLGN
TVIVVEHDSDTIATADHVLDIGPGAGVHGGEVLYSGPVAGLLDCEASLTGGYLSGRLKIA
VPKKRRPVQERHMLELRDACVNNLKHLHVRFPLGLMTCVTGVSGSGKSSLVMETLLKEAE
RYFNDRRGYAKGQPQLFGLEQLDKVIDIDQSPIGRTPRSNPATYTGVMSPVRELMAQLPE
SRARGYKAGRFSFNVKGGRCETCEGDGVLRIAMHFLPDVYVECERCHGRRYNAETLDIRY
KGKNIADILDMTVAEALDFFQNLPGIQGKLQTIVDVGLGYVRLGQSSVTLSGGEAQRMKL
AKELSRRATGRTLYILDEPTTGLHPDDIRQLLDVLGRLVAAGNTVVVIEHNLDVIKTADY
IIDIGPEGGEAGGGIVATGTPEEVAACPQSFTGKFLQQLLPG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgcaatatatccgcatccgcggggcgcggatgcacaatctgaagaacatctcc
gttgacctgcccaggaacagactgatcgtgtttaccggcctctccggttcgggcaagtcc
acgctcgccttcgataccctctacgccgagggccagcgccgttatgtggagtccctttcc
acctatgcgcgccaatttctgggtcagatggacaagccggaggtggaccggctcgacggc
ctttcgcctgcggtggccatcgagcagaaaaccacgggccgcaacccgcgatccaccgtg
ggcacggtcacggagatctacgactacctgcgcctgcttttcgcccgggcggggcagccc
cactgcccgcagtgcggcgcgcccatacgcgcacagagcattgccgacatgatagatctg
ctcatggccgagcctgagggcacgaaatgcgtactgctggcccctgtggtgcggcggcgc
aagggcgagcacgagcaggtcctgcaaaaactgcggcgcgagggctatgtccgggtgcgg
gtggacggagaaatgctccagctcgccggggacatccgcctggaaaagacgaaatttcac
agcatagaggcggtgattgaccgggtggtcatcagggccggtctgcgcaggcggctggac
gaatcggtgagtacggcggtcaagctcggcagcggcgtcatgatcgttttgttcccggac
agcggggaggagcggctctacagcgaatccgcggcctgccaccaatgcgggatttcggtg
ccggcgctcacgccccagctcttttccttcaacaacccgcagggcgcctgcccggactgc
gacggtctgggcgtgacccgctatctggacgaaaaactcctggtgccggatgccagcctg
tccattgccgaaggcgccatcaggccctggtacagccacaagctcgcgccctggaccgtg
ccgtggatggaggccctgtcgcagcactaccactttgaggtgagcacgccttttgaaagg
ctgccggagcgggtgcggcagcttatcctgtacggcagcggcgaggaaaagatcgcactc
agccggggccatggcgcggcccgacgggtctcgcagcagccctttgagggcctgatcccc
cgcctgaaccggctttccagggagacctcctcagtggccatgagcgaactggcggaccgc
tacatgtcggagcgggaatgcccggcctgcaaaggggcgcggctgaagcccgaggcgctg
gccgtgcgcgtgggcccctggggcatcagggacatgagcggcatggcgatcgagcggctg
gcaagcgagctggaggggctcagcctggaggcgaggcacgcccagatcgccgcgccggtc
ctcaaagaaatccgccagcgtctccgctttctgaaaggcgtgggcctgggctatctgaca
ctggcacgctccgcgggcaccctgtccggcggcgaggcccagcggatccggctggcctcc
cagattggttcgggcctggccggcgtgctctacatcctggacgagcccagtatcggcctc
caccagcgggacaaccacaagctcatcaaaacgcttgtcagtctgcgcgatctgggcaac
acggttatcgtggtggagcacgactcggacaccatcgccacggccgatcacgtcctggac
attggcccgggcgcgggcgtacatggcggcgaggtgctctattccggtccggttgccggc
ctcttggactgcgaagcctcgctcaccggcggctatctctccggtcgcctgaaaatagcg
gtgccgaaaaagcggcggcccgtacaggaacggcatatgctggagctgcgagatgcctgc
gtcaacaatctgaagcatctgcacgtgcgctttcccctgggcctcatgacctgcgtgacc
ggggtgtccggttcgggcaagagttccctggtcatggagacgctcctcaaggaggcggag
cgctatttcaacgacaggcggggctatgccaaaggccagccgcaactctttggccttgaa
cagctcgacaaggtcattgacattgaccagagcccgatcggccgtaccccgcgttccaac
ccggccacctacaccggcgtcatgtctccggtacgcgagctgatggcccagttgcccgaa
tcccgggcccggggctacaaggcgggccgcttcagcttcaacgtcaagggcggccgctgc
gagacctgcgagggcgacggggttttgcgcatcgccatgcacttcctgccggacgtctat
gtggaatgtgaacgctgccacggccggcgctacaatgcggaaaccctggacatccgctac
aagggcaaaaatattgcggacattctggatatgaccgtggccgaggccctggactttttc
cagaacctgccgggcattcagggcaagctgcagaccattgtggatgtgggcctgggctat
gtgcggctgggccagtcctcggtcacgctctccggcggcgaggcccagcgcatgaagctc
gccaaggagctgagccgccgggccaccggcaggacgctgtacattctggacgaacccacg
accggcctgcacccggatgatatccgtcagctcctggatgtgctgggccggctggtggcg
gcgggcaacaccgtggtggtgatcgagcacaatctggatgtcataaaaactgcggattat
atcatcgatatcggcccggaagggggcgaggcgggcggcgggatcgtggcgaccggcacg
cccgaagaagtggcggcctgtccgcagtcctttaccggcaaatttttgcaacagctcttg
cccggctga
DBGET
integrated database retrieval system
