Devosia sp. H5989: XM25_20100
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Entry
XM25_20100 CDS
T04003
Symbol
RpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
deq
Devosia sp. H5989
Pathway
deq02020
Two-component system
deq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XM25_20100 (RpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
XM25_20100 (RpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
deq03021
]
XM25_20100 (RpoN)
Transcription machinery [BR:
deq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XM25_20100 (RpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AKR58049
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All DBs
Position
4080167..4081666
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AA seq
499 aa
AA seq
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MALTPRLEVRQAQSLTLTPQLMQSIRLLQLSHLELNAFVEAELLRNPLLEREEGAPDDGA
EAPERAPELSAYEDTVDHSDRIQSAGSIADGLDTAVENVFPEQVGQDSLSQTSVWPEGRG
EGGEAPDLDQFVAARPSLSDHLETQVNLILKAPAERLIARALIDSLNEAGYLAGDLDAIA
AQLGTDEAMVEAVLLKVQGCDPVGVFARTVPECLAIQLREKDRLDPMMARLLANLDLLAA
HDLTGLARAVGADREDLADMLAELRELDPKPGRAFDGAPIEAVVPDVFVREGNGGAWAVE
LNSDVLPKVLVNRVYYATVTRKTRDATEKAFLTDCLQTANWLAKSLDQRAQTILKVATEI
VRQQDGFLVNGIAHLKPMTLKMVAEAIEMHESTVSRVTSNKYISTPRGLYEMKYFFTTAL
ASTSGGEDHSAEAVRHRIRQLIDAEQPADILSDDTIADMLKREQGIDVARRTVAKYREGM
NIPSSVIRRRQKRALTATP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcattgacgcctcggctcgaggttcggcaggcacagagcttgacgctgacgcctcag
ctcatgcagtcgatccgcctgctccagctcagccacctcgagctcaacgccttcgtcgag
gccgagctgctgcgcaatccgctgctcgaacgcgaggaaggtgcgcccgacgacggcgcc
gaagcgcccgaacgcgcccctgagctgagcgcctacgaagataccgtcgatcattccgat
cgcatccagtccgccggctcgatcgccgatggcctcgatacggcggtggagaacgtcttt
cccgagcaggtcggccaggattcgctgtcccagacttcggtctggcccgaaggccgtggc
gagggcggggaggcccccgatctcgaccagttcgtggcggccaggcccagcctctccgat
cacctcgaaacccaggtcaacctgatcctcaaggctcccgccgagcgcctgatcgcccgg
gcccttatcgacagcctcaacgaggccggatacctggccggggacctcgatgccatcgcc
gcccagctcggaacggacgaggccatggtcgaggcggtgctgctcaaggtccagggctgc
gatcccgtcggcgtcttcgcccgcaccgtgcccgaatgccttgccattcagttgcgcgaa
aaggatcggctcgatcccatgatggccaggctcctggccaatctcgaccttctggccgcc
cacgatctgaccgggctcgcccgcgccgtgggggccgaccgcgaggacctggccgacatg
ctggccgagctgcgcgagctcgaccccaagccgggccgcgccttcgatggcgcgcccatc
gaggcggtggtgccggacgtcttcgtgcgcgagggcaatggtggcgcctgggcggtggag
ctcaattcggacgtcctgcccaaggtcctggtcaaccgggtctactacgccaccgttacc
cgcaagacccgcgacgccaccgaaaaggccttcctcaccgattgcctgcagacggccaac
tggctggccaagagtctcgaccagcgggcccagaccattctcaaggtcgccaccgagatc
gtgcgccagcaggacgggttcctggtcaacggcatcgcccatctcaagcccatgacgctc
aagatggtggccgaggccatcgagatgcacgaatcgaccgtcagccgcgtcacctcgaac
aagtacatctccaccccgcgcgggctctacgagatgaagtacttcttcaccaccgccctg
gcctcgacctcggggggcgaggatcattcggccgaagcggtgcgccaccgcatccgccag
ctcatcgatgccgaacagcccgccgatatcctttcggacgacaccatcgccgacatgctc
aagcgcgagcagggaatcgatgtggcgcggcgcactgtggccaagtaccgggagggtatg
aacatcccctcttcggtcatccgccgccgccagaagcgggcattgaccgccacgccgtga
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