Drosophila erecta: 6543345
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Entry
6543345 CDS
T01060
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
der
Drosophila erecta
Pathway
der03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6543345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6543345
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6543345
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6543345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
6543345
NCBI-ProteinID:
XP_001969185
UniProt:
B3N793
LinkDB
All DBs
Position
Unknown
AA seq
2513 aa
AA seq
DB search
MCPRLRAVAVKALLLISKPCAMPFFDTKPADTDSFSDILQFVKEHGLEADRSSLRHLFSV
ISFSDPAPSFTVQLQAKLLGAQLQRQLQSSSFVSNICYAFDQYFASNQKSLKPATVADIV
GQVARLTGINKVCECVFALAVTHSSYTELRHSARNNLTGSLSELIDSYLGKNSSSPASSG
LQEISFDLLQYLLCCLSEYVKPQLEAQFLEKLREEFPRQAVPLVLAPFLYSSTTATIAGA
GASETDAEAEATTSSNSSSSEADALNEVGIEDIYDHLSEIIFTNQGKNNIMDTSWINLIL
EIGYEFTSSVEECKNHLCSRERERAELQSKDVAKIVGLMCRRHSSLLDCNVNLPTPANFW
PGQGQGAGSNSSGSSQTQITPQQQTPGSSNNNDGSDGNSSSDKKDKKETTEATQTWKPDV
FVQALKEVVPQLNWKDVCMELDHPEFVLKDRIGLELLLTILRLATGSNIFPHPECIYRHW
ANTEGQLSLIATMLKNPDLFSFADFVFSQPALDVLKTAPDADNKEISAWKSLHLLEVLLS
IADKGYYTQVHELFKFPAQNCPDVLFLALLNTNPPMTPLRQDLFNQLIPTFLGNHPNSNV
ILASAWSSNNFQLRSNIMNAMSEWYLRGNEFDQVKLSRILDLAQDLKALSALLNARSFLF
IIDLACLASRREYLKLEKWLTDKIREHGEPFMQAIIKVLHRRCPQVINAKVPEDQLPPKQ
TQLLPETVTTMINCLQTCINNCMQPEMVEVIMQMTANVAIMANKARAQQQQPGLVPPPPP
TILRGHRGMDLPGGIVPPPPQQPFSGNLNAQMFGPGMDPLTNMSNNIAGLNLSGPNGAFN
FGNMLTSPSRLMTPGANPYPLNLMQMPQAPPPPNVGNLGRMLPGGPQQQTPTPTPTAPNP
NNPVMADLQIPVSKEVEDEVNSYFQRIYNHQPNPTLSIDEVLDILQRFKESSNRREQEVF
LCMLRNLFEEYRFFCQYPEKELQITAQLFGGIIDRNLVPTFVALGLSLRCVLDALRKPDG
SKLYYFGVTALDRFRTRLHTYNKYCEHIRSIPHFSDFPPHLIQYVEYGMHGQEPPPQKLI
GLSNTIPSAISTGPVTEPIYRNSSMLGNMPASTPGSGPKSSSAMSHATRMKSIANATNID
TLLVANQEEKVTVPPEPVQDKTAFIFNNLSQLNIPQKCDEIKEIMTKEYWPWLAQYLVLK
RASMEFNFHTLYYNFLDALKNGEINRFVTKETLRNIKVLLRSDKGVINFSDRSLLKNLGH
WLGMMTLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVVPFVAKILESSAKSRIFRSPNP
WTMGIMYVLGELHQEPDLKLNLKFEIEVLCKTLNLELAKLRPVIYLKDPSRALLIEQQMS
QPKPKQLEAVAPAPTLPREQPSPAQPPPPPQQQQQPQPPPQQAPPPPSSADVDAQNAAAM
MMVAGGANSTPGSVSSPNLPTDPSQVVLPPPEPRYSYVDVNVSNFQLIGQQLVLPPNTPF
LHANPGIKHIVVNAVERTITDWLQPIVDRSIRIACATTEQIIRKDFALDADENRMRTAAH
QMVRNLAAGMAMITGKDEIARAISQNLHKALLSALNGMPSMAEIQAAAMQLASENVELVC
AFIQKTSAEKAAAEIDRRLSTDFETRKIAREEGNRFVDAQILSYQQERLPEAVRIKVGPA
PATLYAVYSEFARSIPGFQQMSDRDIALFVPKPTDLSQPNVFANDESSMVYAELASKMET
FMNTVMGVPSLQIQASKMHMLLNALMATRRLRDQESAFNLVTRAVEGLTEGLVNMHENME
QMKLYQNIHLRIIGLLHNSFGAPNTERAVTKCFFDIREEVRYNVEAARALITSHFVNLNQ
FDVMLRDCMDNGNNYVAISFGIALLERLIMDDRVINIVSDNEFMATVELLGRLTQHRHRY
PECIVNAIDTLWSGNFNSSSDYSPFNGSERYLSGASHYIHSGMHHVRSCDTDDPPGLQEK
TEFLLKDWVALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRFFRQATHICTDVV
YRMFAEPSLPINQAKNKIFQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKVLGIVLGTL
LKDHEMRGVSFQQVGYHRFFMMLFMELCSADAILESLMHSIVSAFAYTYHLLNPSVAPGF
CFAWLELISHRVFLGRILVQIPGQKGWPLYAQLLQDLFKYLAPFLRNTELGKPVQLLYKG
TLRVLLVLLHDFPEFLCDYHFGFCDTIPPNCVQMRNIILSAFPRNMRLPDPFTPNLKVDM
LSDSSNAPKVLSSYIMNIQPANFKKDLDSYLKARAPVTFLSELRGHLQVTSEPGTRYNMA
LMNALVMYVGTQAIALIRNKNFVPNTSNIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
IYKFWDHDFVHCAPEITKLFESVARSCLAKSNVTQQLNMPVVDGEAQEVANIN
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcccagattgcgggcagtcgctgtcaaggcacttctactgatttcaaaaccctgt
gcaatgcctttcttcgatactaaaccagccgatactgatagcttctccgacatcttgcag
ttcgttaaagagcacggcctggaagcggatcgcagcagcctgcgccacctgttctccgtg
attagcttcagcgatcctgcgccatcatttaccgttcagctgcaggcgaagcttctgggc
gcccagttgcagcggcagctgcagagttcttcgtttgtatccaacatctgctacgctttt
gaccagtacttcgccagcaaccagaagtccttaaagcccgctacggtagcggatatcgtt
ggccaagtcgcccgactgaccggcatcaacaaggtttgtgagtgcgtcttcgccttggcc
gtgacccactcctcgtacacagaactcagacattcggccaggaacaatctaacaggtagc
ctcagcgaactgatcgactcttatttgggtaaaaacagtagcagtcctgctagcagcggt
cttcaggagatctccttcgatctactgcagtatttattgtgctgccttagcgagtacgta
aaaccgcagctggaagcacagtttttggaaaagcttcgggaggagtttcctcgccaggcg
gtaccgctggttctagcgccgtttctgtacagctcgacgacggcgacgattgcgggagca
ggtgccagcgaaacggatgcggaggccgaagcgacgactagcagcaacagctccagttcc
gaggcagatgctctgaacgaggtgggaatcgaggatatttatgaccatttaagcgagata
atattcaccaaccagggcaaaaataatattatggacacatcttggattaatctaatcctt
gaaatcggttatgaatttacatcgagcgttgaagagtgtaaaaatcatttgtgttcccgt
gagcgagaacgcgctgagctccagtccaaagatgttgccaagatcgtgggtcttatgtgc
cgcaggcactcgtccctcctcgattgtaatgtgaatctaccgacgccggcaaacttctgg
cctggtcaggggcagggcgctggcagcaacagcagtggctcttcgcagacacaaatcact
ccgcagcaacagaccccgggcagcagtaacaacaacgatggcagcgatggcaattcgtcc
agtgataagaaggacaagaaggagacgacggaggccacgcaaacttggaaaccagatgtc
tttgtgcaggcgctcaaggaggtggtgcctcagctcaactggaaggacgtgtgcatggaa
cttgatcatcccgagttcgtgctgaaggatcgcatcggtttggagctattgctcaccatc
cttcggctagccactggctctaacatatttccacatccagaatgcatttaccgtcactgg
gcaaacacggaaggtcagctttcgcttatcgcgacaatgctgaagaacccggatctcttc
tccttcgctgactttgtatttagccaaccagcgttggatgtgcttaagacggctccggat
gcggacaataaggagatctcggcctggaagtcgcttcaccttttggaggtgttactctcc
attgcggacaagggatactatacgcaggtccatgagctattcaagttcccagcgcagaac
tgtccagatgttctgtttttggccttattgaacacaaatccgccgatgacgccactgcgt
caggatctatttaaccaactgataccaacgttccttggcaaccaccccaactcgaacgtg
atcttggccagcgcctggagctcgaataacttccaacttcgttccaatatcatgaatgct
atgtccgagtggtatctgcgaggcaatgagttcgatcaggtgaaactgtcgcgcatcttg
gatcttgcccaggatttaaaagcgctatccgcgctgctcaacgcccgctcctttttattc
attatcgacctggcttgccttgcctctcggcgcgagtacctgaagctggaaaagtggctt
accgataaaattcgcgaacacggggagccttttatgcaggctataatcaaggttctgcac
cgccgctgcccgcaggttatcaacgccaaagtgccagaagaccagctgcctcccaagcag
acacagctcttgcccgagacagttaccaccatgatcaactgtctgcaaacgtgcatcaat
aactgcatgcagccggagatggtcgaagtcatcatgcaaatgaccgcgaacgtggccatt
atggctaacaaggcgcgtgcccaacagcagcagccaggattggttccgccgccaccacca
acaattctgcgcggccatcgtggtatggatctgcctggaggaattgtccccccgccaccg
cagcaaccgttctccggaaacctcaacgcgcagatgttcggacctggaatggatccgctg
acaaatatgtccaacaacatagccggcctgaacttgagcggcccgaacggagcatttaat
tttggcaacatgctgacctctccatcgcgtctgatgactccgggagccaatccctatccg
ctaaacctcatgcagatgccgcaagctccaccaccacccaatgtaggaaaccttggccgc
atgctgccagggggtccacaacagcagactccaacgccaactccaacggcccccaatcca
aacaaccctgtgatggccgatctccagatacctgtgtcgaaggaagttgaagacgaggtc
aactcttactttcaacgcatctacaaccaccagccgaatccaacgctgtccatcgatgaa
gtgctggacattttgcaacgatttaaagagtcaagtaaccggcgagagcaggaagtcttt
ttgtgtatgctgcgcaatcttttcgaggaatatcgctttttctgtcaatatccagagaaa
gagctgcagattactgcgcagctatttggtggcattattgaccgaaacctggtgcccact
tttgtagctctgggcctttctctgcgctgtgttttggacgctctccggaagcccgatgga
tccaagctttactatttcggtgtgaccgcactagacaggttcagaactcgattgcacacc
tacaacaaatactgcgagcatatccgctccattcctcacttctcagacttcccgccgcac
cttattcagtatgtggaatacggaatgcatggccaggagccgccgccgcagaagttgatt
ggcctcagcaatacgattccttctgcgatatccaccggtccagtaacggaaccaatttac
aggaacagctccatgttaggtaatatgcccgccagcacaccgggatcagggccgaaatca
agctctgctatgtcgcatgccacgagaatgaagtccatcgccaatgccaccaatatcgac
acacttttagtggccaatcaggaagagaaagtgactgtgcctcccgaacctgtacaggac
aaaactgcctttattttcaacaacctgagccagctgaacataccgcagaagtgcgatgag
ataaaggagattatgaccaaggagtattggccgtggctagcgcaatatttggtcctcaaa
cgcgcatcaatggagtttaacttccacacactctattacaactttttggatgcccttaag
aacggcgagatcaaccgattcgttaccaaagagaccctacgcaacatcaaggtactcttg
cgctccgataagggagttattaatttttccgatcggagtctgttgaagaacctcggacac
tggttgggcatgatgaccttaggtcgcaatcgccccatcctgcagttggacctagatctt
aaatccctcttggctgaagcttaccataagggccagcaggaactgctatttgtggttcct
ttcgtagccaagatccttgagtcatccgccaagtctcgcatcttccgatcgcccaatcca
tggacaatgggtatcatgtacgtgcttggtgagcttcaccaggagccagacctcaaactg
aacctcaagtttgaaatcgaagtactgtgcaaaacgcttaatctggagttggcgaagttg
cgaccagtgatctacctgaaggatcccagtcgagctcttcttattgaacagcagatgtcg
caaccgaaaccgaaacaacttgaggcagtggctcctgcacccactctaccgcgtgaacag
ccatccccggcacaaccgccgccgccaccacaacagcaacaacaaccgcagccgccgccg
cagcaggcacctccaccgccatcctctgcggacgtggacgctcaaaatgctgccgctatg
atgatggtagcagggggagctaatagtactcctggatcagtatcttcgcccaatttacca
accgatcccagccaagtggtactaccgccaccagagccgcgctattcgtacgtggatgta
aatgtgagcaacttccagcttattggtcagcagttggtactgccacccaatacaccgttc
ctgcacgccaatcccggaatcaaacatattgtggtcaacgccgtggagcgcacgataacc
gactggttgcagcctattgtggaccgaagcatccgcattgcctgtgccaccaccgagcag
atcatccgcaaggacttcgccttagatgctgacgagaaccgaatgcgcactgccgctcat
cagatggtacgaaacctggccgccggcatggctatgattaccggtaaggatgagatagcg
cgtgctattagccaaaatctgcacaaggccttgctgtcggctctaaatgggatgcccagc
atggcggagattcaagctgctgctatgcagctggccagcgaaaatgttgagctggtttgc
gccttcattcagaaaacatcggctgaaaaggcagcggctgagattgataggcgtctaagc
accgatttcgagaccagaaaaattgctcgtgaagaaggcaaccgttttgtggacgcccaa
attctcagctatcaacaggagcgtcttccagaagcagtgcgcatcaaggttggcccggct
ccagctacactttatgctgtgtactcggaattcgccaggagcatacctggcttccagcag
atgagcgatcgggatattgccctatttgtgcccaagccgacggatttgtctcagccaaat
gtgtttgctaatgatgagagcagcatggtatacgcggaactagcaagcaaaatggagacc
ttcatgaacacggtaatgggtgtgccatcactccagatccaggctagcaagatgcacatg
ctactcaacgcactgatggcgacgcgtcgactgcgtgaccaggagtccgccttcaatctg
gtgactcgtgcggtcgagggtttgaccgaaggattagttaacatgcatgaaaacatggaa
caaatgaagctgtatcaaaacatccatctccgtatcattggcttgctgcacaacagtttt
ggtgctccgaacacagagcgagcggtgacaaagtgtttcttcgacatccgagaggaggtg
cgatataacgtagaggcagctcgcgcactgataacgtcgcactttgtcaatctcaatcag
tttgacgtaatgctacgcgactgcatggacaacggcaacaattatgtggccatatcgttt
ggtatcgcactgctggagcgtcttatcatggacgatcgagtgattaacattgtttcggac
aacgaattcatggccactgttgagctgttaggtaggctcactcagcatcgccatcggtat
ccagaatgcattgtgaatgctattgatacgctgtggagcggaaacttcaactcaagcagc
gactacagcccgttcaacggcagtgagcgttacttgtctggagcctcacactacatccac
tccggcatgcatcacgtcaggtcatgcgatacagatgatccgccgggcttgcaagagaag
acagagtttctgcttaaggattgggttgcactgtatacacaacaaaaccagcagtctaca
cgcgatgcacgcaacttcggggcatttgtccaaaaaatgaacacatatggcattctgaag
acggacgacttgattacccgttttttccgccaggccacacacatttgcacggatgttgtg
tacagaatgttcgccgagccaagtttaccaatcaaccaggccaagaacaagatattccag
tggattgatgcgttcgtccatctgatcgcaatgctcgtgcgacactcaggtgaagcaggt
aatccaactaccaagatcaacctgttaaacaaagtgttgggcattgtgctgggaacgctg
cttaaggaccatgagatgcgcggcgtgagcttccagcaggttggctaccatcgcttcttc
atgatgctgttcatggagctgtgctcggccgatgcgatactcgagtctctgatgcacagc
attgtgtcggccttcgcctacacatatcacttgttgaatcccagcgtggctccgggcttc
tgctttgcttggttggagctcatttcgcatcgcgtctttctgggtcgcatcctcgtccaa
attcccgggcaaaagggctggccactttacgctcaattgttgcaagacctctttaaatat
cttgcgcccttcttacggaacactgagctcggcaaaccagtccaacttttatacaagggg
acgctacgtgttttactcgttctacttcacgacttccctgagttcttgtgcgactatcat
tttggcttctgtgacaccatcccgcccaactgcgtccagatgcgtaacatcatcctgtcg
gcgtttccgcgcaacatgcgcttgcccgatcccttcacgcccaacctaaaggtggatatg
ctgtcggacagtagtaatgcacctaaggtgctcagcagctacattatgaacatccagccg
gcaaacttcaagaaggatttggactcgtacctcaaggctcgggcgccggttactttcctc
tcggagttacgtggtcacttgcaggtgaccagcgagccaggaactcgttacaatatggct
ctgatgaatgctctggtcatgtatgtgggaacccaagcgattgctttaatcagaaacaaa
aactttgtgcccaacacctccaacatagcacacagcgctcacatggatatctttcagaat
ctggctgttgatttggatacggagggtcgctatttgttcttgaatgctattgcgaaccag
ttgcgctatcccaacagccacacacactacttcagctgtgccgtgttgcatctgtttgcc
gaggccaactcggaggcaattcaggagcagatcactcgcgtgcttctggaacgtttgatc
gttaatcgcccgcatccttggggactgctgatcacttttattgagctgatcaaaaatccc
atctacaagttctgggaccatgactttgtgcactgtgcgccagagattaccaagctcttt
gaatcggtggcccggtcctgtctggccaagtcgaacgtcacccagcagttgaacatgcca
gtcgtcgatggcgaggcccaggaggtagccaacatcaactga
DBGET
integrated database retrieval system
