KEGG   PATHWAY: dev00970
Entry
dev00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Dehalococcoides mccartyi VS
Class
Genetic Information Processing; Translation
Pathway map
dev00970  Aminoacyl-tRNA biosynthesis
dev00970

Organism
Dehalococcoides mccartyi VS [GN:dev]
Gene
DhcVS_1053  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
DhcVS_1097  [KO:K14230]
DhcVS_1116  gatC; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit [KO:K02435] [EC:6.3.5.6 6.3.5.7]
DhcVS_1117  gatA; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
DhcVS_1125  trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
DhcVS_1146  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
DhcVS_1169  [KO:K14233]
DhcVS_1220  [KO:K14235]
DhcVS_1221  [KO:K14228]
DhcVS_1222  [KO:K14225]
DhcVS_1223  [KO:K14222]
DhcVS_1225  [KO:K14228]
DhcVS_1246  [KO:K14228]
DhcVS_1247  [KO:K14219]
DhcVS_1248  [KO:K14237]
DhcVS_1440  gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit [KO:K02434] [EC:6.3.5.6 6.3.5.7]
DhcVS_1441  [KO:K14218]
DhcVS_1462  [KO:K14219]
DhcVS_1507  [KO:K14224]
DhcVS_1518  [KO:K14232]
DhcVS_1524  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
DhcVS_163  [KO:K14237]
DhcVS_182  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
DhcVS_265  [KO:K14218]
DhcVS_309  pheS; phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
DhcVS_310  pheT; phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
DhcVS_312  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
DhcVS_326  [KO:K14234]
DhcVS_331  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
DhcVS_364  [KO:K14230]
DhcVS_372  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
DhcVS_50  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
DhcVS_513  [KO:K14233]
DhcVS_516  serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
DhcVS_517  lysU; lysyl-tRNA synthetase (class II) [KO:K04567] [EC:6.1.1.6]
DhcVS_541  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
DhcVS_6  hisS1; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
DhcVS_61  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
DhcVS_612  aspS1; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
DhcVS_62  [KO:K14218]
DhcVS_626  [KO:K14233]
DhcVS_627  [KO:K14233]
DhcVS_629  [KO:K14219]
DhcVS_637  [KO:K14232]
DhcVS_639  [KO:K14225]
DhcVS_641  [KO:K14230]
DhcVS_654  [KO:K14219]
DhcVS_659  thrS; threonyl-tRNA synthetase (thrS) [KO:K01868] [EC:6.1.1.3]
DhcVS_662  [KO:K14228]
DhcVS_667  [KO:K14232]
DhcVS_693  glyS; glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
DhcVS_711  [KO:K14231]
DhcVS_712  [KO:K14228]
DhcVS_713  [KO:K14223]
DhcVS_714  [KO:K14220]
DhcVS_722  [KO:K14229]
DhcVS_750  hisS2; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
DhcVS_757  [KO:K14225]
DhcVS_778  [KO:K14229]
DhcVS_830  [KO:K14219]
DhcVS_831  [KO:K14226]
DhcVS_870  [KO:K14234]
DhcVS_871  [KO:K14236]
DhcVS_872  [KO:K14234]
DhcVS_892  [KO:K14227]
DhcVS_895  [KO:K14224]
DhcVS_896  [KO:K14223]
DhcVS_908  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
DhcVS_918  [KO:K14221]
DhcVS_966  [KO:K14237]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
dev00250  Alanine, aspartate and glutamate metabolism
dev00260  Glycine, serine and threonine metabolism
dev00270  Cysteine and methionine metabolism
dev00290  Valine, leucine and isoleucine biosynthesis
dev00300  Lysine biosynthesis
dev00330  Arginine and proline metabolism
dev00340  Histidine metabolism
dev00380  Tryptophan metabolism
dev00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

DBGET integrated database retrieval system