Dehalococcoides mccartyi VS: DhcVS_1490
Help
Entry
DhcVS_1490 CDS
T01136
Name
(GenBank) metal dependent phophohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dev
Dehalococcoides mccartyi VS
Pathway
dev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DhcVS_1490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dev03019
]
DhcVS_1490
Messenger RNA biogenesis [BR:
dev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DhcVS_1490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_NusA_2nd
KH_KhpA-B
KH_2
LapA_dom
BTBD16_C
DUF4407
DUF668
Motif
Other DBs
NCBI-ProteinID:
ACZ62587
UniProt:
D2BJT7
LinkDB
All DBs
Position
1384467..1386050
Genome browser
AA seq
527 aa
AA seq
DB search
MFEFFMETAPTTTTGLPLSAILAIFFSFIIGIVFGGMALFVFRGFIMNRQLRIAQRKATK
MLADSKTEAKDVLVEAKHEADKVRNSAESELKERRSELAKQENRVMQKTEALDRKLENLE
QREQSLTNREKSIDETQSQIEEIRTAELKRLEEVANMTTEQAKSSLLEMLEGEMQQETSR
RLREWEIKIKAEADEKAREVVSQAIQRCASDVVTETTTNVVPLPSDEMKGRLIGREGRNI
RALEQATGVDLIIDDTPEAVTISSFDPVRREIARQALSKLIIDGRIHPARIEEVVTKAKE
EVEAAMIASGEQAAYQAGVHGLRPEIIKVMGRLKYRTSYGQNVLQHSIEVAQMSGMIGSE
LGVNVTLARRAGFLHDIGKAVDRDVEGTHTQIGADMVKQWEKSPEVIKGVAEHHFDTPTV
SIWGFIVSAADAISSARPGARRESLENYIKRLKALEEIADSFKGVEKSFAIQAGREVRIM
VKPDEIDDLGSMRLARDIVKKIEDGLEYPGQIKVTVIRETRSVDFAK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagtttttcatggagacagcgccgacaacaactaccggcctgcctttgtctgcc
attctggcaatcttttttagttttattataggtattgtattcggcggcatggcccttttt
gtattcaggggctttataatgaaccgccagctccgcatcgcccagcgaaaagcaaccaaa
atgctggctgactctaaaacggaagctaaagatgtgctggtggaagccaaacacgaagcg
gacaaggtccgcaattccgccgagtctgagcttaaagaacgccgttctgaactggctaaa
caggaaaaccgggttatgcagaagaccgaagccctggaccgtaagcttgaaaatcttgaa
cagcgcgaacagtctttgaccaaccgggaaaaaagtattgacgaaacccagtctcagatt
gaagaaatacgcacagccgaactgaaacgtctggaagaagtggccaacatgactactgag
caggccaaatcaagtctgcttgaaatgctggaaggtgaaatgcagcaggagacctcccgc
cgcctgcgtgagtgggagataaaaataaaagccgaagcggatgaaaaagcccgcgaggtt
gtttcccaggctatccagcgttgtgcctctgatgtagttaccgaaactactaccaatgtc
gtacccctgccaagcgatgaaatgaaaggcaggctgattggccgcgaaggccgcaatata
cgggctctggaacaggccaccggcgtagacctgattatagatgacaccccggaggcagtc
actatttccagttttgacccggtgcggcgggaaattgcccggcaggcactttccaaactt
attattgacgggcgtatccacccggctcgcatagaagaagtggtaaccaaagccaaagag
gaagtggaagccgccatgatagcttccggcgaacaggccgcttatcaggcaggcgttcac
ggactgcggcccgaaataatcaaagtaatgggacggctgaaataccgtaccagttacgga
cagaatgttcttcagcacagtatagaggtagcccaaatgtccggcatgataggcagcgag
ctgggggtaaatgttacccttgccagacgggctggcttcctccatgacataggcaaagcg
gttgaccgagacgtggaaggcacccatacccaaataggtgcggatatggttaaacagtgg
gaaaaatcacctgaggttatcaagggtgtggctgaacaccactttgacactcccactgtc
tccatctggggctttatcgtatctgccgcagacgccatttcttcggccagacccggtgcc
cgccgcgaatcacttgaaaactacatcaaacgcctcaaggccctcgaagaaattgccgac
agcttcaaaggggttgaaaaatcctttgccatacaggccgggcgcgaagtgcgcatcatg
gttaaacctgacgagattgatgatctgggttctatgcggctggccagagatattgtcaag
aagattgaagacgggctggagtaccccggacagattaaggttaccgttatccgggaaacc
aggtccgtagactttgccaagtaa
DBGET
integrated database retrieval system
