Defluviicoccus sp. SSA4: HWD60_07170
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Entry
HWD60_07170 CDS
T06717
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex02024
Quorum sensing
dex03060
Protein export
dex03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HWD60_07170 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HWD60_07170 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HWD60_07170 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dex02044
]
HWD60_07170 (ffh)
Enzymes [BR:
dex01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HWD60_07170 (ffh)
Secretion system [BR:
dex02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HWD60_07170 (ffh)
Eukaryotic Sec-SRP protein
HWD60_07170 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_31
AAA_33
AAA_22
AAA_16
YqeC
VirC1
nSTAND3
AAA_18
AAA_28
AAA_24
AAA_5
APS_kinase
ResIII
NACHT
AAA
AAA_14
FAD_binding_4
ParA
KTI12
ArsA_ATPase
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QLH38764
UniProt:
A0A7D5RYL5
LinkDB
All DBs
Position
1473526..1474941
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AA seq
471 aa
AA seq
DB search
MFEGLSDRLSGIFERLRKRGALSEADVAEAMREIRIALLEADVALPVVKEFIAGVRSRAV
GQEVLRSVTPGQMVVKIVHDHLVDLLRGSEADENCAPGEGAGINLAGAPPVAVLLVGLQG
SGKTTTAGKLAVRLRKRDKKRVLMASLDVYRPAAQQQLAVLGKQTETAVLDVIADQSPVA
IAERAMQTARKQGFDVVILDTAGRLTIDERMMEEAAAVKAATAPVETLLVADALTGQDAV
QLARAFNEQVGITGLILTRVDGDGRGGAALSMRAVTGCPIRLIGLGEKLDALEAFQPDRI
AGRILGMGDVVGLVERAAEVIEREDAEKLAQKLAKGEFSLEDMAAQFKQLRKMGDLKGLL
GLLPGIGKMKQQLNDAKIDDKMIARQEAIILSMTPDERRNPKLLNASRRRRIAAGSGTSV
QDVNRLLKQHQQMAGMMKKVGKMGKRGLLGGKMPPDGLPPGMFPPGMLPPR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagggcctgagcgatcgactgagcggcatattcgagcggctgcgcaagcgtggt
gcgctgagcgaagcggacgtggccgaggcgatgcgcgagatccgcatcgcgctgctggaa
gccgatgtggcgctgccggtggtcaaggagttcatcgccggcgtccgcagccgtgccgtc
ggtcaggaggtgctgcgcagcgtcactccgggccagatggtggtgaagatcgttcacgat
catctggtcgatctgctgcgcggcagtgaggctgacgaaaactgcgcaccnggcgaaggt
gcgggcatcaaccttgccggcgccccgccggtggcggtgctgctcgtcggtctgcaggga
tccggcaagacgaccaccgccggcaagctcgccgtccggctgcgcaagcgcgacaagaag
cgggtgctgatggcctcgctcgacgtctatcgcccggccgcccagcagcagctggcggtg
cttggcaagcagacggaaacggcggtgctcgacgtgatcgccgaccagtcgccggtggcg
atcgccgaacgggcgatgcagaccgcgcgcaaacagggcttcgacgtggtgatcctggac
accgccggccggctcaccatcgacgagcggatgatggaagaagcggcggcggtgaaggcc
gcgaccgcgccggtggaaacgctgctggttgccgatgcgctcaccggtcaggacgcggtg
cagctcgctcgcgcgttcaacgagcaggtcgggatcaccggcctgatcctcacccgggtt
gacggcgacggccgtggcggcgcggcactctcaatgcgcgcggtaaccggctgtccgatc
cggctgatcggtctgggcgagaagctggacgctctggaggcgttccagccggaccgcatc
gccggacgcatcctcggcatgggcgacgtggtggggctggtcgagcgcgcggccgaggtg
atcgagcgcgaagacgccgagaagttggcgcagaagctggcgaaaggcgagttcagcctc
gaagacatggccgcccagttcaagcagctgcgcaagatgggcgatctgaaggggctgctc
gggctgctgcccggcatcggcaagatgaagcagcagctgaacgatgccaagatcgatgac
aagatgattgcgcgccaggaggcgatcatcttgtcgatgacgccggacgagcgacgcaat
ccgaaactgttgaacgcctcgcgccgcaggcggattgcggcagggtccggaacctcggtg
caggacgtcaaccgtctgctgaagcagcaccagcagatggcgggcatgatgaagaaggtg
ggcaagatgggcaaacgcggcctgctcggtggcaaaatgccgcccgatgggctgccgccc
ggaatgtttccaccggggatgctgccgccccgctga
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