Defluviicoccus sp. SSA4: HWD60_14110
Help
Entry
HWD60_14110 CDS
T06717
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HWD60_14110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dex03021
]
HWD60_14110
03400 DNA repair and recombination proteins [BR:
dex03400
]
HWD60_14110
Enzymes [BR:
dex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HWD60_14110
Transcription machinery [BR:
dex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HWD60_14110
DNA repair and recombination proteins [BR:
dex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HWD60_14110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF4270
Motif
Other DBs
NCBI-ProteinID:
QLH39846
LinkDB
All DBs
Position
complement(2990139..2991170)
Genome browser
AA seq
343 aa
AA seq
DB search
MKGSLVIQKNWQALIKPAKLDIVPGTDPRRVATIVAEPLERGFGLTLGNALRRVLLSSLQ
GAAVTALRIDGVLHEFSMIAGVREDVTDIILNIKSLALRMGGEGPKRVTLTATGPGEVTA
GMISTGHDIEVMNPELVICTLDDGARLAMELVVENGKGYVPAAANRSEDMPIGLIPIDAV
YSPVRKVTYKVENTRVGQVTDHDKLSLELVTNGAVGPEDAVALAARILQDQLQLFINFEE
PQAAVEEERKDDLPFNKNLLRKVDELELSVRSANCLKNDNIIYIGDLVQKTEADMLRTPN
FGRKSLNEIKEVLAQMGLQLGMEIXNWPPENIEDLAKRLEEPF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttctctcgtgattcagaagaattggcaggccctgatcaaaccggcgaagctc
gacatcgtgccggggaccgaccccaggcgggtggcgacgatcgtcgccgagccgctggaa
cgggggttcggtcttaccttgggcaacgcgctgcggcgtgtgttgctgtcgtcgctgcag
ggagctgcggttacggcgctgcgcattgacggcgttctgcacgaattctcgatgatcgcc
ggtgtgcgggaagatgttacggacatcatcctcaacatcaagtcgctggcgctgcggatg
ggcggggaaggtccgaagcgggtgacgctgacggcgaccggaccgggcgaagtgaccgcg
gggatgatctccaccgggcatgacatcgaggtgatgaacccggaactggtgatctgcacc
ttggacgatggcgcgcgcctcgcgatggaactggtcgtcgagaacggcaagggctacgtt
cccgccgcggcgaaccggagcgaagacatgccgatcggtctcatcccgatcgacgcggtg
tactcgccggtgcgcaaggtgacctacaaggtcgagaacacccgtgtcggacaggtcacc
gaccacgacaagctgtctctcgagctggtgacgaacggcgcggtcgggccggaagacgcg
gtggccctcgccgcgcggatcctgcaagatcagttgcagctgttcatcaacttcgaggag
ccccaggcggccgtcgaggaggaacggaaggacgacctgccgttcaacaagaaccttctg
cgcaaggtcgacgagcttgagctgtcggtgcgctcggccaactgcctgaagaacgacaac
atcatctacattggcgatctggttcagaagacggaagccgacatgctgcggacgccgaac
ttcggacgcaagtcgctcaatgagatcaaggaagtgctggcacagatgggcctccagctt
ggcatggagatcnccaactggccgccggaaaatatcgaagacttggcgaagcgcctggaa
gagcccttctga
DBGET
integrated database retrieval system
