KEGG   Dyadobacter fermentans: Dfer_3539
Entry
Dfer_3539         CDS       T00970                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
dfe  Dyadobacter fermentans
Pathway
dfe00230  Purine metabolism
dfe00240  Pyrimidine metabolism
dfe01100  Metabolic pathways
dfe01232  Nucleotide metabolism
Module
dfe_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:dfe00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Dfer_3539
   00240 Pyrimidine metabolism
    Dfer_3539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dfe03400]
    Dfer_3539
Enzymes [BR:dfe01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Dfer_3539
DNA repair and recombination proteins [BR:dfe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Dfer_3539
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN TSCPD DUF1651 Zn_Ribbon_TF Pox_D5
Other DBs
NCBI-ProteinID: ACT94747
UniProt: C6VTX9
LinkDB
Position
4321228..4323780
AA seq 850 aa
METIKSSQSERTYTSDEAFQASLEYFKGDDLAARVWVNKYALKDSFGAIYEATPDDMHHR
IASEIARIEQRYPNPLSEAEIFDLIKDFKYIIPQGSPMTGIGNPYQIASLSNCFVIGNNG
ESDSYGGIMKIDQEQVQLMKRRGGVGHDLSHIRPKGSPVKNSALTSTGIVPFMERFSNST
REVAQDGRRGALMLSVSIKHPDSESFIDAKMEQGKVTGANVSVRIDDEFMQAVDAGTTYR
QQYPIQSHTPTHIKDIDATALWKKIVHNAWQSAEPGILFWDTIIRESVPDCYADLGYQTI
STNPCGEIPLCAYDSCRLLAINLFSYVEDPFTDKAKFNWDLFKKHIAAAQRMMDDIIDLE
LEKIDAILQKIDEDPEDAEVKRVERNLWLNIQTKANEGRRTGIGITAEGDMLAALGLRYG
SDEGNAFAVEIHKTVALEAYRGSVHTAKERGAFTIFDSEREKNNPFILRLKEADAQLYYE
MLEYGRRNIALLTIAPTGTTSLMSQTTSGIEPVFLPVYKRRRKVNPNDKDVRVDFVDEVG
DSWEEYVVFHHRFKQWMEVNGLDTSKNYAQKDLDELVKKSPYYKATSNDVDYLKKVKMQG
AIQQWVDHSISVTINMPNDVTEELVGECYMEAWKAGCKGVTVYRDGSRSGVLISNTEKKE
ETQEGAPTPFPTERPQTLEADVVRFQNKKDKWIAFIGLIDGRPYEIFTGFADDEDGILIP
RWVNEGLIIKNREADGSSRYDFQYKNTRGYKTTIEGLSYKFNPEYWNYAKLISSTLRHGM
PIEKVVDLISSLQLDEAINTWKAGVARALKRYIPDGTEAAKQKCQNCGSTNLLYQEGCLT
CKDCGSSKCG
NT seq 2553 nt   +upstreamnt  +downstreamnt
atggaaactataaaatcttcacaatcagaaagaacctatacctctgacgaggcctttcag
gcatcgctggaatattttaagggcgacgacctggcggcgcgcgtttgggtgaataaatat
gcgttgaaggattccttcggcgccatttacgaggccacgccggacgatatgcaccaccgc
atcgcgtcggagatcgcgcgcattgagcagcgctatccgaacccgctcagcgaggccgaa
attttcgatctgatcaaggattttaaatatattatcccgcagggcagccccatgacgggc
atcggcaatccgtaccagatcgcctcgctttcgaactgtttcgtgattggtaacaatggc
gaatccgactcctatggcggcattatgaagatcgaccaggagcaggtgcagctcatgaag
cgccgcggcggcgtggggcacgatctctcgcacattcgcccgaaaggctcgccggtaaaa
aactcggcattgacttccacaggcattgtgccgttcatggaacgtttctccaactccacc
cgcgaagtggcgcaggacggccgcagaggcgcgctcatgctttcagtgtccatcaaacac
cctgattccgaaagctttatcgacgctaaaatggagcagggcaaagtgaccggcgccaat
gtctccgtacgcatcgacgatgaatttatgcaagcggtggacgccggaacaacctaccgc
cagcaatatccgatccaaagccacactccgacgcacattaaagacatcgatgcgacggcg
ctttggaagaaaatcgtgcataatgcatggcaatcggccgagccgggtatcctgttttgg
gacaccatcatccgtgagtccgtgcccgattgctacgctgacctgggttatcagaccatt
tctacaaatccctgcggcgaaatcccgctgtgcgcttacgactcgtgccgtttgctcgcg
atcaacctgttttcgtacgtcgaagatccatttaccgacaaggcgaagtttaactgggac
ctcttcaaaaagcatatcgcggctgcacagcgcatgatggacgacatcattgatcttgaa
ctggaaaaaattgatgcaatccttcaaaaaatcgacgaagatcccgaagatgcagaggtg
aagcgcgtggagcgtaacctttggctgaacatccaaacgaaagccaacgaaggccgccgg
acgggcatcggtatcaccgccgaaggcgatatgctggcagcgctgggccttcgctatggc
agcgacgagggcaatgcattcgcggttgaaatccataaaaccgttgcattggaagcctat
cgcgggtcggtgcatactgcaaaagagcgcggtgcattcacgatcttcgattcggaaaga
gagaaaaacaacccgttcatcctccgtttgaaagaagccgacgcgcagctttattacgaa
atgctcgaatacggccgccggaatatcgcattgcttaccattgcaccaacgggaacaact
agcctgatgtctcaaacgacctcgggcatcgagccggtgtttttgccggtttataaaaga
agaagaaaagtaaacccgaacgacaaggacgtgcgcgtggatttcgtggacgaagtaggc
gattcgtgggaagaatatgtggttttccaccatcggtttaagcaatggatggaggttaac
gggctggataccagcaagaattacgcgcaaaaagacctcgacgaactggttaaaaaatcg
ccttactacaaagccacttccaatgatgtggattacctcaaaaaggtaaaaatgcaggga
gcgatccagcaatgggtggaccattcgatcagcgtgacgatcaacatgccgaacgacgtg
accgaagagctcgtaggtgaatgctatatggaagcatggaaagcgggctgcaaaggcgtt
accgtataccgcgacggctcacgttcaggcgttttgatctctaacacggagaaaaaagaa
gaaacgcaagaaggcgctccgaccccattcccgaccgagcgcccgcagacgctcgaagcc
gatgtggtgcgttttcagaataaaaaagacaaatggatcgcattcatcgggctgatagac
ggccggccgtacgaaatcttcaccggttttgcagacgatgaagacggtattctgatccct
cgctgggtgaatgaaggcctgatcatcaaaaacagggaagccgacggcagctcacgctat
gatttccaatacaaaaacacgcgcggctacaaaacgacgatcgaagggctatcctacaaa
ttcaatcccgagtactggaattacgcaaagctgatttccagcacattacgccacggaatg
ccgatcgaaaaagtggtggacctgatcagcagcctccaactcgacgaggcgatcaacacc
tggaaagccggcgtagcgcgcgcattaaaacgctacatccccgacggcaccgaagccgcc
aagcaaaaatgccagaactgcggatcaacgaatttgctgtaccaggaaggatgtttgacg
tgcaaggactgcggatcgtcgaagtgcgggtga

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