Desulforamulus ferrireducens: B0537_01905
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Entry
B0537_01905 CDS
T04823
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dfg
Desulforamulus ferrireducens
Pathway
dfg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dfg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B0537_01905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfg03021
]
B0537_01905
03400 DNA repair and recombination proteins [BR:
dfg03400
]
B0537_01905
Enzymes [BR:
dfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B0537_01905
Transcription machinery [BR:
dfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B0537_01905
DNA repair and recombination proteins [BR:
dfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B0537_01905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AQS57955
UniProt:
A0A1S6IT61
LinkDB
All DBs
Position
374056..377505
Genome browser
AA seq
1149 aa
AA seq
DB search
MRSMAYPEKVGNRVRWNYGKLREVLDLPNLIEVQRNSYEWFLQEGLREVFHDISPIQDFT
GNLVLEFLDYNLGEPKYQVEECKERDVTFAAPLRVKVRLINKETGEVKEQEVFMGDFPLM
TSKGTFIINGAERVIVSQLVRSPGVYFADVIDPSGKRLYTSTIIPNRGAWLEFETDVNDH
IFVRIDRTRKIPATVLIRALGYSSNAMIAELFDNDKFVQETLTRDNTDSEEEALVEIYKR
LRPGEPPTVESARSLLNTLFFDPKRYDLAHVGRYKLQKKLKHGILYRYPEGEDGPKEYDR
YLDKEVPVKREFIRELTKEDIIATFRYLLGLMKGEGTVDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMTIQDVDVITPQVLINIRPVVAAIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLIGSLSTYARINTF
GFIETPYRIVDRENKRVTDEIRYLTADEEEGHIIAQANAVLDENGYFVEERVNARRGHET
LLVPTDRVEFMDVSPKQVFSVATALIPFLEHDDANRALMGANMQRQAVPLLRCQAPVVGT
GMEYRAAKDSGVVVISQSSGEVVRVTANEIVIKTDDGRKEHYKLLKFTRSNQGTCINQKP
IVSKGERVEAGQIIADGPATDKGELALGRNILVAFMTWEGNNYEDAILISEKAVKEDYFT
SIHIEEYECDARDTKLGPEEITRDIPNVGEDILKDLDERGIIRVGAEVRPGDILVGKVTP
KGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEAGKIVDVKVFSRENGDELPPGVNQL
VRVYIAQKRKISEGDKMAGRHGNKGVVARILPEEDMPFMADGTPVEIVLNPLGVPSRMNI
GQVLETHLGWAAKALGFHVATPVFNGASEEAIWESLKRANLPEDGKTILYDGRTGVPFDN
RVTVGYIYMIKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGA
AYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLCLDVKVLAEN
EEEIEIKEIEEDVTETAKELGIELPEERRVAPAKEDDNEDYEDDEEETDEFEETFLEETE
DDFSLDDED
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcaatggcttacccggaaaaagtaggaaatagggtgaggtggaactatggcaaa
cttcgtgaagtgctagatttaccaaacctcattgaagttcaacggaactcatatgaatgg
ttcttgcaggaaggtctgcgggaagttttccatgacatctctcccatccaggactttaca
ggaaacctggtgttagaatttctggactacaatctgggagaacctaaataccaggtggaa
gagtgcaaggaacgcgatgtaacctttgctgcaccgctgagagttaaagtgcgcctgatc
aataaggaaacaggtgaagttaaggaacaggaagttttcatgggggacttccccttaatg
acatcaaagggaacctttattattaatggcgcagaaagagtaattgtcagccaattggta
cgttcccccggggtttactttgcagatgtcatagaccccagtggtaaaagattatatacc
tccaccattatccccaaccggggggcttggctggagtttgagaccgatgtcaacgatcat
atctttgtgcggattgatcgcacccgtaaaattcctgccactgttttaattagggctttg
ggctatagttccaacgctatgattgccgagttgtttgacaacgataaatttgtgcaggaa
actttaaccagagacaacactgactctgaagaagaagcattggtagaaatttacaagcgt
ctgcgccctggtgaaccgcctacggtggagagcgctcgttctttgttaaatactttattc
tttgaccccaaacgatatgacctcgcccatgtaggtcgttataaattacagaaaaaactt
aagcatggtattctctaccgttatcccgagggtgaagacggtcccaaggaatatgatcgg
tatttagataaagaagttcctgtgaaacgagagtttatccgggagctgaccaaagaggac
attattgcaaccttccgttatctgctaggcctaatgaagggagaaggaacggttgacgat
atcgaccatctgggtaacagaaggctgcgttcagtgggtgagctgctacaaaaccagttc
cgcattggtctgtcacggatggaacgtgtggtcagggaaagaatgaccattcaggatgtg
gatgtcattactcctcaggtattgattaatatcagacctgttgtggcagccattaaagaa
ttctttggttccagccagttgtcccaatttatggaccaaaccaaccctttagcagaacta
acccataaacgccgtttgtctgccttgggtcccggcggtctttctcgggaacgtgcgggc
tttgaagtgcgtgacgtgcaccactctcactatggacgtatgtgtcccattgaaaccccg
gaaggtcccaacattggtctgattggctcactttctacctatgccaggatcaataccttt
ggctttatcgaaactccctaccgtattgtagatagagaaaataaacgtgtaaccgatgag
atcagatacctgacagcggatgaagaagaaggacatattattgctcaggctaacgctgtg
ttggatgaaaacggttacttcgtggaagagcgtgttaacgcccgtcggggccacgaaact
ttgttagtaccaacggatcgggtggagtttatggacgtatccccgaaacaggtattctcc
gtggccacagcactcattccctttttggaacacgatgatgccaaccgtgctctgatgggt
gccaacatgcagcggcaggcagtacccctgctcagatgccaggcgccggtggtgggcaca
ggcatggaataccgtgccgccaaagactccggggtggttgtcatcagccaatccagtggt
gaggttgttagggttaccgccaatgaaattgttattaagactgacgatgggcgcaaagaa
cactataaattgcttaaatttacccgttccaaccagggtacctgcatcaaccagaaaccc
atcgtatctaagggagaaagggttgaagcagggcaaatcattgccgacggcccggcaacg
gacaaaggcgaattggccctgggacgcaacatcctggttgcctttatgacctgggaaggc
aacaactacgaggatgctattttaatcagtgaaaaggcagtcaaagaggattactttacc
tccatccacatagaggaatatgaatgcgatgccagggataccaaactgggtcccgaggaa
attacccgtgatattcctaatgtgggcgaagatattttaaaagatttagacgaaagaggt
attatcagggttggcgcagaggtaaggcccggggacatcctggtgggcaaagttaccccc
aagggtgaaacagaactcacggcagaggagcgcctgctgcgtgccatctttggagaaaag
gcacgggaggtgcgggatacttccctgcgggtacctcacggtgaggccggcaagattgtt
gatgtgaaggtgttctcccgggagaacggcgacgaacttcctccgggtgttaaccagctt
gttcgcgtctacatcgcccaaaagagaaagatctctgagggtgacaagatggctggtcga
catggtaacaaaggggtagtggccaggatcctcccagaggaagatatgcccttcatggca
gatggcactccggtggaaattgtactcaaccccctgggtgttccctctcgtatgaacata
ggtcaggttttggaaacccacctgggctgggcagctaaagctttgggcttccatgtagcc
actccggtatttaacggtgcttccgaagaagccatttgggagtctttgaaacgggctaac
ctgcctgaagacgggaaaactatactatatgacggacgaaccggtgtcccctttgataac
cgagtgactgtgggctacatttatatgattaagttacaccacttggtagatgataaaatt
cacgcccgttccaccggcccttactcactggtaacgcaacaacccctgggcggtaaagct
cagtttggtgggcagcgttttggtgagatggaggtttgggctctggaagcctatggtgca
gcttataccttacaggaaattctcacggttaaatctgacgatgtggtgggtcgcgttaag
acctacgaagccattgtcaagggcgagaatgttcccgaaccgggtgttcctgaatccttt
aaggtattaattaaagaactgcaatccctctgtcttgatgtcaaggtactggcagagaat
gaagaggaaattgaaattaaagaaattgaagaagatgtcacggaaactgccaaggaatta
ggaattgagttgcccgaggaaagacgtgtagcccctgccaaagaggatgataatgaggat
tacgaggacgatgaggaagaaaccgatgagtttgaggagaccttcctagaagaaaccgag
gatgatttcagtctggatgacgaggactaa
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