Dickeya fangzhongdai DSM 101947: CVE23_20475
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Entry
CVE23_20475 CDS
T05277
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00040
Pentose and glucuronate interconversions
dfn01100
Metabolic pathways
dfn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CVE23_20475
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVE23_20475
Enzymes [BR:
dfn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CVE23_20475
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ATZ96138
UniProt:
A0A2K8QSP5
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Position
4558319..4559443
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AA seq
374 aa
AA seq
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MKSFIAPIAAGLLLAFSQSSLAATGGYATTSGGNVTGAVSKTAASMQDIIDIIDAAKLDA
KGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDARGVEIKDFTKGITIIGANGSS
ANFGIWIVNSSDVVVRNMRIGYLPGGAQDGDMFRIDNSPNIWLDHNELFAANHECDGTKD
GDTTFESAFDIKKGATYVTISYNYIHGVKKVGLAGFSASDSAERNITYHHNIYNDVNARL
PLQRGGNVHAYNNLYTNITSSGLNVRQNGKALVESNWFENAVNPVTSRYDGSNFGTWVLK
NNNITKPADFATYNITWTADTKAYVNADSWTSTGTYPTVTYSYSPVSAQCVKDKLANYAG
VGKNLAELTSSACK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattcattgccccgattgccgccggtctgctgctggcctttagtcaatccagt
ctggctgcgacaggcggttatgccaccacttccgggggcaacgtgacaggagccgtcagc
aaaaccgcagcatccatgcaggacatcatcgatatcatcgatgccgccaaactcgacgcc
aaaggcaaaaaggtgaaaggcggcgcgtacccgctggtcatcacctataccggtaacgaa
gattcgctgatcaacgccgctgccgccaatatctgcggccagtggagcaaagacgcccgc
ggcgtggaaatcaaagacttcaccaaaggcatcaccatcatcggcgccaacggctcttcc
gccaacttcggcatctggatcgtgaactcctccgacgtagtcgtacgcaacatgcgtatc
ggctacctgccgggcggcgctcaggatggcgatatgttccgtatcgacaactcgccgaac
atctggctggaccacaacgaactgtttgccgccaaccacgagtgtgatggcaccaaagac
ggcgacaccacgttcgaatccgcctttgacatcaagaaaggcgccacttacgtcaccatt
tcctacaactacatccacggcgtgaagaaagtcggtctggcagggttcagcgcctctgac
agcgccgaacgcaacatcacttaccaccacaacatctacaatgacgtcaacgcccgtctg
ccgttgcagcgcggcggtaacgtacacgcctacaacaacctgtacaccaacatcaccagc
tctggtctgaacgtgcgtcagaacggcaaggcgttggtcgaaagcaactggttcgaaaac
gcggtgaacccggtgacgtcccgctacgacggcagcaatttcggcacctgggtgctgaaa
aacaacaacatcaccaaaccggctgatttcgctacctacaacatcacctggacggcggat
accaaagcttacgtcaacgccgatagctggacttccaccggtacttacccgactgtgacc
tacagctacagcccggtcagcgcacagtgcgtgaaggacaaactggctaactacgctggt
gtcggtaaaaacctggccgagctgaccagctcagcttgtaaataa
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