Dehalogenimonas formicexedens: Dform_01281
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Entry
Dform_01281 CDS
T04654
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase pdxS subunit
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo00750
Vitamin B6 metabolism
dfo01100
Metabolic pathways
dfo01240
Biosynthesis of cofactors
Module
dfo_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Dform_01281 (pdxS)
Enzymes [BR:
dfo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Dform_01281 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
Dus
NMO
IGPS
NanE
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
APV44609
UniProt:
A0A1P8F806
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All DBs
Position
1213416..1214309
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AA seq
297 aa
AA seq
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MEQEVTVGTFKVKSGLAQMLKGGVIMDVTTPDQARIAEEAGACAVMALERVPSDIRAEGG
VARMADPTVIKAIMKAVSIPVMAKCRIGHFVEARVLEAMGVDFIDESEVLTPADEAYHVW
KQDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNVVEAVRHMRAVQDGIRRVVAA
PMEELMAIAKELNAPFEQILALHNTGKLPVVNFAAGGIATPADAALMMQLGAEGVFVGSG
IFKSSDPARRAHAIVKATTHYQDPVVIAEVSEALGEAMPGIEIGQIKPEQLLAKRGW
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggaagtaaccgtcggtacgtttaaagtcaagagcggcttagcccagatgctc
aagggtggcgtcatcatggacgtcactaccccggaccaggcccgcatcgccgaagaggca
ggtgcttgtgcggtcatggctttggagcgtgtgccgtcggatatccgtgccgagggcggg
gttgcccggatggctgatcccacggttatcaaggccatcatgaaagccgtcagcatcccg
gtgatggccaaatgccgcatcggacatttcgtggaagcccgggttctggaggccatggga
gtggacttcatcgacgaatcagaagtcctgacccccgccgatgaggcttatcatgtctgg
aaacaagatttcaaagtcccgttcgtctgcggttgccgtgacctgggagaagctttgcgc
cgcatcggcgaaggcgccgccatgatccggaccaagggtgaagccggaaccggtaatgtt
gtcgaagccgtccggcatatgcgggcagtccaggatggtatcagacgggttgtcgcggcg
ccgatggaagaactcatggcgattgccaaggaactcaatgctccgtttgagcaaatcctc
gcgttgcataataccgggaaactgccggttgtcaattttgccgctggcggcatcgccact
cctgccgacgccgcgctgatgatgcaacttggcgccgagggcgtgtttgtcggttccggt
atttttaagagttccgatccggcccggcgcgctcatgccatcgtcaaagccaccactcac
taccaggacccggttgtcatcgccgaggtttcagaagctcttggcgaggccatgcccggc
atcgagatcggccagatcaaacctgagcaacttttggccaaacgcggttggtag
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