Megalodesulfovibrio gigas: DGI_4012
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Entry
DGI_4012 CDS
T02851
Symbol
kpsF
Name
(GenBank) KpsF/GutQ family protein
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg00541
Biosynthesis of various nucleotide sugars
dgg01100
Metabolic pathways
dgg01250
Biosynthesis of nucleotide sugars
Module
dgg_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DGI_4012 (kpsF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dgg01005
]
DGI_4012 (kpsF)
Enzymes [BR:
dgg01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
DGI_4012 (kpsF)
Lipopolysaccharide biosynthesis proteins [BR:
dgg01005
]
Lipid A
DGI_4012 (kpsF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AGW15226
UniProt:
T2GGA1
LinkDB
All DBs
Position
unnamed:complement(13662..14648)
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AA seq
328 aa
AA seq
DB search
MIYRMNYLEIGRHILTLEVEGLVAVRESLGEHFTRAAECLVACTGRLVLTGVGKSGLIAK
KIASTFSSIGAPSIFLHPVEALHGDLGMVRERDLIIALSNSGETDELLCVMPELAMLGCK
SIAITSNLESSLARTVDFPVPVKVPREACILNLTPTASTTAALAVGDAFAACLVQARRFG
EKDFRRRHPGGALGRRLSLKLNQVMMRENLPAVHADLPLMRAIKVMDTAGFGTVFVVDDN
RRLLGVLTDGDLRRKFVREALNLAAAVSESMTANPRRIMLGSSVAEAMDIMEQHAITVLP
VVDEQGLLHGLVHIHDLLGRGKIAFSAL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatataccgcatgaattatctggaaataggccggcacatcctcacgctggaggtggaa
gggctggtggccgtccgcgagtccctgggcgagcacttcaccagggcggcggaatgtctg
gtggcctgcacgggccggctggtgctcacgggggtgggcaagtccgggctcatcgccaag
aaaattgcctccaccttttccagcattggcgcgccgtccatttttctgcatcctgtggag
gccctgcatggggatttgggcatggtccgcgagcgggatttgatcatcgccctgtccaac
tccggggaaaccgacgagctgttgtgtgtcatgccggagctggccatgctggggtgcaag
agcatcgccattaccagcaatctggaatcctccctggcccggaccgtggattttcccgtg
ccggtcaaggtgccgcgagaggcgtgcatcctgaacctaacgcccacggccagcaccacg
gcggccctggccgtgggggacgcctttgccgcctgcctggtgcaggcccggcgttttggc
gaaaaggatttccgtcgccgccaccctggcggggcactgggacgacgcttgtccctgaag
ctgaatcaggtgatgatgcgcgaaaatctgcccgccgtgcatgcggatctgcccttgatg
cgggccatcaaggtcatggataccgccggcttcggcacggtgtttgtggtggatgacaac
cgccggctgctgggcgtgctcacggatggcgacctgcgccgtaaattcgtgcgcgaggcc
ctcaatctggcggcggcggtgtccgaatccatgactgccaacccccggcgcatcatgctg
gggtccagcgtggccgaggccatggacatcatggaacaacacgccatcaccgtgctgccc
gtggtggatgaacagggcctgctgcatgggctggtgcacatccacgacctgctcggccgc
ggcaagattgcattttcggcgctgtaa
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