Dendronephthya gigantea (soft corals): 114516441
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Entry
114516441 CDS
T06112
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dgt04040
]
114516441
Ion channels [BR:
dgt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114516441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_3
Ank
Ank_4
Ion_trans
Ank_5
Cortex-I_coil
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
114516441
NCBI-ProteinID:
XP_028391716
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MSKDNSSKGTHKKGDVFIFAPPEDDTNVHDDNLLNIAEGGNVVEEWYPGLPYSDFDAHDG
KFDCIQNTDEPSLIILQRREDPFDFLQIQNAPGFSDQTDHATGTRIVLTSMKKTERYTGF
PANDDLPLKTKTSLLKRTISISDDKAINDHIQVAEVKYLMSCTSGHKLDENTKVRCCKIA
SAIFFDDGDNLKTLLVNDVTDSTEHISEERIPLLKKRNIREYFHDPLCSAEIQRRILEAV
ELDSLNCLNVLCDTYEKHPFSKKEDIHLFHRRFGLSFWPLSERPKETALHLIANKHTSVE
AMEVLQKRPKFLDDFSDIPDSHDSSPLLLAIKCNNMEVVKRLLARKPDLNKRNKHDETPI
LVAALHDAEDVINEMLKTYPETELFEVMKKIDGKGHSILYPASQSGKAKVLNLIMEKGWW
PDFLEQEKKITEEWESFVCNVCATGCIELAREILIQNNELLDAKCDKRAITPLMRAAEAN
QKEIVQLIFDINKSDSDLFMACDKNGRNVFHHAVGNPDILRYLLEKCTQSKSTKAINKMD
KWEMTPIKLTAVMRLEESFKMLLNHTTNKEDLFAAHFIDSVHIEILKTGLLNWRRMDRKA
VADLLDGKIKKNQPFLEAAKRGNVELMEFFLEQGANHLQKTPEDQTVLHYAVISGELAAM
EFLLSRKEFREIIDFGDDKNMTAAGYATKLGKAAILRCLLENGAKMKRKTARHNILDCAY
GHYETAQESLKEIIEFCTNEETKNDKTHLLQELFEDSRFGADRIMAQLIEKTPEVAMMIF
DLCVNEHRHYAYTSYCKMEEERKVLYLFFPFKRHKTDGKLEAIESMVNNERDDCLGHPLV
LRFLNYKMHSTGFKKWFYFNVFFYLTFLLTLTVYSTLQSQGLYNLKSPGMIALSLIILAF
CALHFIKEILQLRLSTANYIKDSDNYIEWVIFICAVIYVVPGGSTKTKVQITAGVISVFL
GWINFSFFLKRFSLFGIYIIMAKRVFRTVFKVLPFVLLFIVAFSLSFSLLLFLDKGFKNI
PISILTTFVMMTGELDYRDIFLPSGPFNVLQKILLVLFILMISVTVMNLLTGLAVGDIND
IMARSKEEKRISRAKLVITLERNFNRIPFLSPPEFKDFVEDPQEKECQSSWLLRQWKKVY
DDDEVEEQLKVMAEKKKDDCAKQLNELKEEIKKTNEFVKEFEAKIENKLQNIEALLVNFQ
RRGSGPLSS
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggacaattcgtcaaagggaacacataagaaaggcgatgtttttatatttgcg
cctccggaagacgataccaatgtacatgatgacaaccttttgaatattgcagaaggtggg
aacgttgtggaagaatggtatcctggactgccttattcagattttgatgcacacgacggg
aaattcgactgtatacagaatactgatgagcctagtctaataatcctccagcgacgggag
gatcctttcgattttttacaaatccaaaacgcacctggattttcagatcaaactgatcat
gcaacaggcaccagaattgtgctgacttcaatgaaaaaaactgaaaggtatacaggtttt
ccagcgaacgatgatcttcctttgaagacaaaaacgtccttattaaaaaggacgatatcc
atttctgatgataaagctattaatgatcatatacaagtagcagaagtaaaatatttaatg
agctgtacatctggccacaaactagatgaaaacactaaagtcagatgctgtaaaattgcg
tcggcaatattttttgacgatggtgacaacttaaagacacttcttgtaaatgatgtcact
gatagcacagagcatatttcggaggaaagaattccgttgctcaagaagagaaatataaga
gaatatttccacgacccattgtgtagcgcggaaattcaacgtcgtatactagaagctgtc
gagttggacagtttgaattgtttgaatgtgctctgtgatacttatgaaaagcatcccttt
tcaaaaaaggaagatatccatctgtttcaccgccggttcggtttatctttctggccattg
agcgaacgtccaaaagagactgctcttcaccttattgcaaacaaacatacatcagttgaa
gcgatggaagttttacaaaagcgaccgaaatttctggatgatttttcagacattccggac
agtcatgattcatcaccacttcttctggcgatcaaatgcaacaatatggaggtggttaag
cgattgctcgcaagaaaaccagacttaaacaagcgaaataaacatgatgaaacgcctatt
cttgtggcagctttacatgacgctgaagatgttataaacgaaatgctgaagacatatcct
gaaacagaactttttgaagtcatgaaaaagattgatggaaagggccattctattctctat
cccgcctcacaaagtggaaaggcaaaggtgcttaacctcattatggagaagggatggtgg
cccgattttttagaacaagagaagaaaataacagaagaatgggaatcatttgtttgcaac
gtttgtgccacaggatgtattgaactggcaagagaaattttaatacagaataatgaactt
ctggatgcaaaatgtgataaacgtgcaattacccctcttatgagagccgccgaagcgaac
caaaaggaaattgtccaacttatcttcgacattaataaatcggatagtgatctttttatg
gcttgtgataaaaatggcaggaatgtcttccaccatgctgtgggaaaccctgatattcta
cgttatctacttgaaaagtgcacgcagagcaaaagtaccaaagctattaataaaatggac
aaatgggaaatgacgccgataaagcttacagcagttatgagattggaggagagtttcaaa
atgctcttaaatcacactacaaataaagaggatttatttgctgcccatttcattgatagt
gtgcatatagagattttgaagacgggtcttctcaactggcgacgaatggatcgcaaagca
gtagctgatctgctggatggaaagatcaagaaaaatcagccattcttagaggccgccaag
agaggaaacgtcgagttaatggaatttttcttggaacaaggagcgaatcatttacaaaaa
accccagaagatcaaaccgtgcttcattacgccgtaatttctggggagcttgctgccatg
gaatttctgctgagtagaaaggaattccgggaaataatcgattttggggatgacaagaac
atgaccgcggctggttatgccactaagctcggaaaggcggcgatactaagatgtctgttg
gagaatggtgcgaaaatgaaaaggaagacggccagacataacatcttagattgtgcgtat
ggacattatgaaactgcccaggaatctttgaaagaaattattgagttttgtacaaatgaa
gaaacgaaaaatgataaaacccacttacttcaagagttgtttgaagactcccggtttggt
gctgatcgtattatggcacaactgattgaaaaaacacccgaagtcgctatgatgattttt
gacctgtgtgttaatgaacatagacattatgcctacacttcttattgtaaaatggaggaa
gaaagaaaagttttgtacttgttctttccattcaaacggcacaaaacggatggaaagctt
gaagcaattgaaagtatggttaacaacgaaagagacgactgtttgggccatccactagtt
ttaagattcctaaactacaagatgcattcaacgggatttaaaaaatggttctactttaat
gtttttttctacctcacgttcctgctaaccttaacggtatatagcactcttcaaagtcaa
ggattatacaatttaaaatcaccaggaatgattgcattatcgcttattattttggccttt
tgtgcacttcatttcatcaaagaaatactacagttgcgtctaagtactgctaattatata
aaagactccgataattacatcgaatgggtgatattcatctgcgctgtcatttatgtggtg
ccaggaggaagtacgaagactaaagtgcagattacagctggagttatatcggtgtttctg
ggttggataaacttctcctttttcctgaaaagattttcattgtttgggatctacatcata
atggctaaaagagtttttcggaccgttttcaaggtgttaccgttcgtcttgttgttcatc
gttgcattttcgctgtcattttcgctgctccttttcctagataaaggttttaaaaatatt
ccaatttcaattttgacaacattcgtcatgatgactggagaattggactatcgggatatt
tttctaccaagtggaccatttaacgttttgcaaaagatacttcttgtgttatttattctc
atgatctccgtcaccgtgatgaatttgctgactggtcttgctgttggagatattaatgac
ataatggctcgttcgaaagaagaaaaaagaatttctagggcaaagcttgtcattacattg
gaaagaaattttaacagaattccatttctctcaccacctgaatttaaagatttcgtagag
gacccacaagagaaagaatgtcagtcatcgtggctattacgccaatggaaaaaggtatac
gacgatgatgaagttgaggaacaattaaaagtaatggctgaaaaaaagaaagacgattgt
gcaaaacagttgaatgagctgaaagaagagatcaaaaagacaaatgaattcgtgaaagaa
ttcgaagcgaagattgagaataaattacagaatattgaagcgttgttggtaaactttcaa
agaaggggttcaggtccactcagcagttaa
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