Dendronephthya gigantea (soft corals): 114529289
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Entry
114529289 CDS
T06112
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114529289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114529289
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
114529289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_14
TPR_19
TPR_12
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_17
ANAPC3
ARM_TT21_C
TPR_9
HEAT_Nup120
TPR_Slam
TPR_MalT
ARM_TT21_2nd
COG4_N
Vps39_1
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
114529289
NCBI-ProteinID:
XP_028406847
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MASKEVKNELKSARESIQNKDYHAALKHCKAVLKLDKANYNAFVFVGVASIEVGKPEQAL
AAYKKAIEVNSDNILAWQGLSSLHEKEPEIASNEERIEVYKRLMKHYENDDKKKWSDNVL
KLIEIYKTLKNVDEALTLLKLLCDADCDKDKGFLCCKTIDLLVENKNDLTAEQSDELINS
YRKFLSEGIEPSEETHQYFQNYLNLLLDKMHGNGAFPVREVISEAKRMKAFFEKDEFALN
LLARLYLGQTSEVDVEEAEIYEELLQLNPESPFAHFGLGKIKLLEKNFQEVEEVLDKGLQ
LCGTSSVAWYFMTQAQLFHHKYDKAFQNSNTGILVMKDDRDMSYNHDDVHFNLSFCKAKA
SSWLGKNGITNAIELLQELNALQPNNPNVSIELGRIFVRKHDLEEARQCFENVCNIIEKD
SPKCLTLEGEIYAAQDEFENAEKSFRLAIELQQDVAENHLNLGKLYWKMEGRYRTDRDKC
LEHLLKAAKLDSYIPTTFLYLGKYYETVGRGHEALRCYKKSHDLSPLCDETAEALVDAYM
SSGQEEQAAELCRKFAVKTGVGRVKWAFLRLGLYHLKNEQFNDAVHCFQNALRVDDLDAN
TWECLGEAYMSRGSYTPALASFTRATELNPSLLYSHYQIAVVKHLLGLFEEAVAVYKTIL
SEHCDYVPALKGLGATYISYARSSLEQDFHGRALDYIQNAVNILARGIECDGSLSCVWKL
QGDACSLVFNIHETKVRVELPESLRKFLKLEDDSAVTKMELLSLAASCFGQAVRYNSSCA
SLWQDVGLSYFKMSSIDKDPNERRKLCERSMKALKKALNIEPDNYIIWNTLGLVAASEDV
NNPELSQHSFIKSIESQKNATAWTNLGVLYLRYGKADMANKAFNAAQCTDPTYTQAWIGQ
ATIAEMFANIEAMDLYRHSNELGTHVEGYLGYANWVCHTLLPRDQASCMLKGKPFADLSH
LPDKLKSVVLIASFGLTKYSDQIKNNPCAYNMHGILMEHQQLYSQAAKFYSCSLELLKSA
ENVNNDYCNIVRANYARVLRALGKYSESINVYQEISPLSNFHHITGLALSFLMLGDFQQS
YQAYEQAFALATSEAQKSHVRAAMGMVRYMSNQLDEAKLDLCESSDLRPSSEQGLLALSA
LGLITSDITLAAAALAELVKIGQKGDENLISEASFLFASFYALQGSPNAGKIYIVKEIYR
RPHSSLLWNCLAKFILRFQTNQLKEAGRCADAAHRLGDRNVEDVSITCAYSAIGSGRDPT
CVQQSRISPGLISAQKTVHMRPDCLTNWALLSAAVTEETTYQSTARRKRLCELVTHFGLT
EAIEAADRLLTRPDVFERRNINMADENQKWFALHYGYSLYYSGKTDEAIQHCAQALQIWS
EDSSFTDRIKLLLVEINCRSFNDGLDNSSCLQDMATVLTLNRQDCYAWQFAGLFHEQHGF
IKAAEFCYRNSLELSSREGLDTVLLNTEESSHA
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaagaagtaaaaaatgaactaaaaagtgcccgtgaatcaattcaaaataaa
gattatcatgcagctttaaaacattgcaaagcagttctgaagttggataaggcaaactat
aatgcatttgtatttgttggggttgcttccattgaagtggggaaaccagagcaagcgttg
gctgcgtataagaaagctatcgaagtgaattcagacaatattcttgcatggcagggttta
tcatcattgcacgagaaagaaccagagattgcaagcaatgaagaacgtattgaagtttac
aaaagattgatgaaacattatgagaatgatgacaaaaagaagtggtcagataatgttttg
aagttaattgagatatataaaacattgaagaatgttgatgaggcactgaccctgctgaag
ttgctttgcgatgcagattgtgataaagacaagggattcttgtgctgtaaaactattgac
ctcctggtggaaaataagaatgacttgactgctgaacaatcagatgagttaataaattca
tataggaaatttctaagcgaaggcattgaaccaagtgaggaaacacatcagtattttcaa
aattatctcaacctacttctggacaaaatgcatggtaatggagcatttcctgtaagggaa
gtaatatctgaggcaaaacgaatgaaagctttttttgaaaaagatgagtttgctctgaat
ctccttgcacgactctatcttggacagacttcagaagttgatgttgaagaagcggagatt
tatgaagaacttttgcagctcaatcctgagtcaccttttgctcattttggtttggggaaa
attaaattgttggaaaagaattttcaagaagttgaagaagttttagataagggtcttcag
ctttgtggcacttcatcagttgcgtggtatttcatgacacaagcccagttattccatcac
aaatatgacaaagcttttcaaaattctaacacaggaatattggtcatgaaggatgatcga
gacatgtcatataatcatgacgatgttcattttaatcttagtttctgcaaagcaaaagcc
agcagttggctgggaaagaacgggataactaatgcaattgaattactacaagagctcaat
gcgttacaaccaaacaatcccaatgtttccattgaacttggcaggatatttgtcagaaaa
catgatttagaggaagcaagacagtgttttgaaaacgtctgcaatatcattgaaaaagat
tcgccaaaatgtttaacgctcgagggagaaatttatgccgctcaagatgaatttgaaaat
gccgagaaaagttttcgtttggcgattgaactgcagcaagatgttgctgaaaatcatctt
aatcttggcaaactttattggaaaatggaagggcgatatagaactgatagggacaagtgt
ttagagcatttgttgaaggcggccaagttagactcctatattcccacgacatttttatat
cttggtaaatattatgagacggttggacgaggacatgaagcattgcgctgttacaagaag
tctcacgatttgagtccactttgcgacgaaactgctgaagctttggtcgatgcatatatg
agctcaggacaagaggaacaagctgctgaactctgcagaaaatttgcagtaaaaactggc
gtaggaagagtaaaatgggcatttctacgtcttggcttgtatcatcttaagaatgagcag
ttcaacgatgctgttcactgttttcagaacgctttacgagtggatgaccttgacgcaaac
acttgggaatgtctgggcgaggcatacatgagtcgaggcagttatacacctgcattggct
tcgtttactcgggcaacagagttaaatccatctctgctgtactcgcactatcaaattgca
gttgtaaagcatcttttgggtttgtttgaagaagctgtggcggtttacaaaacaattctc
tctgaacactgtgattacgttccagcattgaaaggactgggtgcgacttacatttcgtac
gcaaggtcctctcttgagcaagactttcacggcagagctttggattatattcagaatgcg
gtcaatattttggcacgcggtatagaatgtgatggtagtctatcatgtgtttggaaactg
caaggcgatgcttgttcacttgtatttaatatccatgaaacaaaagtaagagttgaacta
cctgaaagtcttcgaaaattcctgaagttagaagacgatagcgctgttactaaaatggaa
cttctgagccttgccgcaagttgttttggtcaagcagttcgttataattcgtcctgcgca
agtctttggcaagatgttggtctgagttatttcaaaatgtcttcaatcgacaaagacccc
aatgaacgaagaaaactatgtgaaagatcaatgaaggcgctaaagaaagctctaaacata
gaacctgataactacatcatctggaatacccttggcttggtcgctgcttcagaagatgtg
aacaacccagagctcagtcaacattcatttatcaaatcaattgaatcgcagaaaaatgca
acagcttggacaaacttgggagttttgtatttgcgatatggaaaggcagatatggctaac
aaagcgttcaacgcagctcagtgtactgaccctacctatactcaagcttggatagggcaa
gcaacaattgctgaaatgtttgccaatattgaagcaatggatctctatcgacactccaac
gagcttggaacacacgttgaaggatatcttggttatgccaactgggtttgtcatactttg
ttaccaagggatcaagcatcgtgtatgttaaagggaaaacctttcgctgatctctcgcat
ctaccagacaagcttaaaagcgtggtcctaattgcttcgtttggtttaaccaagtattca
gatcaaatcaagaacaatccttgcgcttataacatgcacggtattttaatggaacatcaa
caactttacagtcaagcagcgaagttttacagctgttctttagaactattgaagagcgct
gagaatgtcaacaacgattattgtaacattgttagagctaactatgccagagtcttgcgt
gctctgggaaaatacagtgagtcaataaacgtgtatcaagaaatcagtccattgagtaat
ttccatcatatcactggcttggctttgtctttcctgatgctcggtgattttcagcaaagc
tatcaagcctacgagcaagccttcgctctggccacaagcgaggctcagaaatctcatgtt
cgcgctgcgatgggtatggtgagatacatgtcaaaccagctcgatgaagctaagcttgat
ttatgtgaaagttccgacctaaggccatccagcgaacaaggtcttcttgctcttagcgcc
ctgggtttgatcacgtctgacatcacgctggctgctgcagcactcgctgaacttgtcaag
attggacaaaaaggcgatgaaaacttgatttccgaggcaagctttctttttgcaagtttc
tacgctttgcaggggagtccaaatgctggtaagatttatatcgtgaaagagatttataga
agaccccacagcagtttgttgtggaactgcttggccaagttcattcttcgttttcagacg
aatcagttgaaggaggctggaagatgtgctgatgctgcgcacagacttggagacagaaat
gttgaggatgtttcaatcacgtgtgcctacagtgcaatcggttccggtcgtgatccaacg
tgtgttcaacaaagcagaatctcacctggactaatatcagcccagaaaacggtccatatg
agaccagattgtttgaccaactgggccttgctctcagcagcagtgactgaggaaactaca
taccaaagcacggctcgaagaaaaagactttgtgagctggtcacacactttggattaact
gaagccatcgaagccgctgatcgtcttctcacaaggccagacgtttttgaaagacggaat
ataaacatggcagatgaaaaccagaagtggtttgctcttcattatggatattctttgtac
tactctgggaaaacggatgaagctattcaacactgtgctcaggcgcttcagatttggtcg
gaagactcctctttcacggacagaatcaagctgcttctcgtagagatcaattgtcggtct
tttaatgatggtttagataactcgagctgtcttcaagacatggcaacggtgctgaccctc
aacagacaagattgctatgcttggcagtttgctggattatttcatgagcaacatggtttc
ataaaggcagctgagttctgctatcgaaattctctggagttatccagtagagaagggtta
gatacagttcttctgaataccgaagaaagctctcatgcatag
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integrated database retrieval system
