Dendronephthya gigantea (soft corals): 114536838
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Entry
114536838 CDS
T06112
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114536838
03041 Spliceosome [BR:
dgt03041
]
114536838
03036 Chromosome and associated proteins [BR:
dgt03036
]
114536838
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114536838
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114536838
mRNA cycle factors
Common to processing body (P body) and stress granule
114536838
Spliceosome [BR:
dgt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114536838
Chromosome and associated proteins [BR:
dgt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114536838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
114536838
NCBI-ProteinID:
XP_028413978
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MSHGAPDSNRSLDQQFAGLDLNAGDPQSRTPGTQKSPQNTYIPPHLRGGGGSNQRSADSF
QENYHGGRGGNRGYSRSSSYERGGGYGGNSYGGYSGGGYGGGYSGNHYNNFGSGGNRNSY
GGGYGRRGGGGGGFKDRNYDSPKDSWTSLPPAEEWGKLLPRNDRLERELFAASNTGINFD
KYEDIPVEATGDKCPAHIDNFGDCADLGEVITHNIGLCHYSKPTPVQKHAIPIIKNSRDL
MACAQTGSGKTAAFLIPILSRIFEEGPPAPPDMKHLGRRKQFPIGLILAPTRELAIQILD
EAKKFAYRSHVRPSVVYGGADVGQQMRDLDRGCHLLVATPGRLVDMLDRGKIGLDVCKFL
VLDEADRMLDMGFEPQIRRIVEQDTMPKTGDRQTLMFSATFPKEIQILARDFLSNYIFLA
VGRVGSTSENITQKIVWVDDVDKRSFLLDLLNASGPESLTLVFVETKKGADALEDFLYRE
KYPATSIHGDRSQREREDSLHSFRSGRTPILVATAVAARGLDIPHVKHVINFDMPSDIEE
YVHRIGRTGRVGNTGLATSFFNDRNRNISKVLVQILTEAKQEVPTWLESIAGEYHSGGSR
NKNYRRTGNSAFGSRDYRQQANRGGGGGGGYMQGNPGYGQGYGQGYGAGNYGGGAPYGGG
GNYGGYGGYGGYAPRGNPGNMGGRSNDWWN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatggtgccccagattctaaccgaagtctagatcagcaatttgctggcctagac
ttgaacgccggagatccgcaaagccggacccctggcacacaaaagtcaccacaaaacact
tacatccctcctcatctccgtggaggaggtggaagcaatcaacgttcagcagattctttt
caggaaaattatcatggtggtagaggtggaaaccgaggctattcccgttcatccagctat
gaacgtggtggcggctatggtggcaatagttatggtggttatagtggtggtggttacgga
ggtggctactctggcaaccattacaacaactttggtagtggtggaaatagaaacagttat
ggtggcgggtatggtcgacgtggtggtggtgggggtggcttcaaagacaggaactatgac
tcccccaaagattcttggacgtctcttccccccgcagaagagtggggaaagttattgccg
aggaatgaccgattggaaagagagctgtttgcggcatccaacaccggcatcaacttcgat
aaatatgaggatatcccagtagaagcgaccggtgacaaatgccctgctcatattgataac
tttggtgattgtgcagatcttggggaagttatcacgcacaacattggtttgtgccattat
tccaaaccaactccggtgcagaagcatgctatcccgatcatcaagaattcgcgtgatctt
atggcctgtgcccagacaggctctggcaagactgccgcgtttcttattccaattctgagt
agaatatttgaagaaggaccgccagctccaccagacatgaaacatcttggccgaagaaag
cagttccctatcggtcttattcttgctcccactcgcgagcttgccattcagatcctggat
gaagctaaaaagtttgcctaccggtctcacgtacggccatcagtagtgtatggcggtgca
gacgttggccagcagatgcgtgacttggaccgtggctgtcacctactcgttgccactcct
ggtcgtcttgtggacatgttggatcgcggcaaaatcggtctcgatgtctgcaaatttcta
gtgttggacgaggctgatcgaatgctggacatgggtttcgagccacagattcgacgaatt
gtggagcaagatacgatgccaaagactggtgatcgacaaacgctcatgttcagtgcaacc
ttcccgaaggaaatacagatacttgctcgcgatttcttaagcaactacattttcctggcc
gtcggacgcgttggctccaccagtgaaaatatcacacaaaagattgtctgggttgatgat
gtcgacaagagatcattccttttggatttactcaatgcttcaggtccagagtctttgact
ttggtctttgtggaaaccaagaaaggagcagacgccttggaagatttcttgtaccgggaa
aagtatcccgcaacttccattcacggcgatcgctcccaaagagaacgcgaggattcgttg
cattcgttccgtagtggcagaaccccaatcctcgtggcaactgcggtcgctgctcgtggt
ttggatataccacatgtgaagcacgtgatcaactttgacatgcccagtgatattgaagag
tatgtccatcgtattggtcgtactggtcgtgtgggtaacacaggtttggcgacctcattc
ttcaatgatcgcaacaggaacatcagcaaagttcttgtgcagatattgactgaagcaaaa
caagaagtgcccacttggttggaatcgattgcaggagagtatcacagcggcggctctcgc
aacaagaactaccgacgcaccggtaacagcgcattcggttcgcgtgattatcgtcaacaa
gccaaccgcggcggtggtggtggcggcggttacatgcagggcaaccctggttatgggcaa
ggctatggtcaaggttatggtgccggaaactatggcggcggtgcgccttacggaggtggc
ggaaactatggtggctatggaggttatggtggctatgctccacgtggtaatcctggcaac
atgggcggtcgctcgaacgactggtggaattga
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