Dendronephthya gigantea (soft corals): 114540528
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Entry
114540528 CDS
T06112
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03030
DNA replication
dgt03420
Nucleotide excision repair
dgt03430
Mismatch repair
dgt03440
Homologous recombination
dgt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114540528
03420 Nucleotide excision repair
114540528
03430 Mismatch repair
114540528
03440 Homologous recombination
114540528
03460 Fanconi anemia pathway
114540528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dgt03000
]
114540528
03032 DNA replication proteins [BR:
dgt03032
]
114540528
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114540528
Transcription factors [BR:
dgt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114540528
DNA replication proteins [BR:
dgt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114540528
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114540528
MMR (mismatch excision repair)
114540528
DSBR (double strand breaks repair)
HR (homologous recombination)
114540528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF223
IBR
DUF2774
Motif
Other DBs
NCBI-GeneID:
114540528
NCBI-ProteinID:
XP_028416450
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSNPLTAGAIKEIFLDHSNLPKSPVLQVLGLKKVQGNQGGSERYRMILSDGIHLHTCAML
ATQLNDMVVDNQLDTKAVIRLDKYICNIIHETRKVLIILELSIIKKGSECPRYGDPKQYV
ENTDEKSNTGTTQNNNKPSVQQNPNPGSANVKRNQAPPSGSRFASHQTPVSRTQTGPTVF
PISSLNPYNNKWTICARVTSKSSIREWSNSKGQGRLFSVDLIDESGEIRATCFTELVDRF
YPLLEQNKIYYISKGSMRPANKRFCSLKNDYELTFNNDTTVELCQENNSIPTLQFNFVEI
AKIQDVQPENLIDIVAVCSNIAEVKEVNTRAGKQVSKRDLTLMDSTASVTCTLWGKEAEN
FEKYVGSNPIIAMKGVKVSDFGGRTLSTLPSSTMMIDPDTIQEAFKLRGWYDNVGHSESI
GSISGQRGDGMSTSVYKTISDIKKEGLGTSEKPDYFNLVAIVSYFKKDNCLYKACPKQDC
NKKVIEDADHYRCEKCNQTYPNFKHRLLLKINVADYTGEQWLTCFQDTAEQLLGKTADEI
GTLRDTDEKAFEQVFSKNAFIKKLFRVKAKVDTYNDETRVNCSADRVASLDLRKEARRLA
EEIEKLMVSNGQV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccgttgactgcaggagcgattaaggaaatttttttagatcatagcaatttg
ccaaaatctcctgttttgcaagtgttgggtttgaaaaaagttcaaggcaatcaaggcgga
agtgaaagataccggatgattctttctgatggcatacatcttcatacatgtgctatgtta
gccactcaactaaatgacatggtagttgataatcaacttgacacaaaagctgtcatccgg
ttggataaatacatctgcaatattatccatgaaacacgaaaggttttaattattttggaa
ttgtcaatcatcaagaagggatcggagtgcccacgttatggtgatccaaaacagtatgtc
gagaacacagatgaaaagagcaacactggtacaacccaaaacaacaataagcctagtgtc
caacaaaatccaaatcctggctcagcgaacgttaaacgaaatcaggccccacctagcggg
tccagatttgctagtcaccaaactcctgtatcacgaactcaaaccgggcctactgtcttt
cctatcagcagcctgaatccttacaacaacaagtggacaatttgtgccagagtgacttca
aaatctagtattagagaatggtcaaactcgaaaggccaaggacgattgttcagtgttgat
ctaattgatgaatctggtgaaatacgagctacatgtttcaccgaacttgtggacagattt
tatccattacttgaacaaaataagatttactacatctcaaaaggaagtatgcgaccagca
aacaaaagattttgctcattaaaaaatgactatgaattgaccttcaataacgatacaaca
gttgaactgtgtcaagagaacaacagcattcccactttgcagttcaatttcgtcgaaatt
gccaaaatccaagatgttcaacctgaaaatctgattgatatcgttgctgtttgttcaaat
atcgctgaggtgaaagaggttaacactagagctggaaagcaggtctcaaaacgagatcta
actttgatggattcaactgcttctgtaacctgcacactttggggaaaagaagcggaaaac
tttgaaaagtatgttggatcgaatccaattattgccatgaaaggggttaaagtctcagat
tttggaggtcgcacgctgagcacgttgccctccagtacgatgatgatagacccagatact
atccaagaagcgtttaagctgcgtggatggtatgataatgttggtcattcagaaagcatc
ggttcaatatctggacagagaggagatggaatgagtacgagtgtttataaaactatcagt
gatattaagaaagaaggactaggaacgtcagagaaacccgactactttaatttagtcgca
atcgtttcctactttaagaaagataactgtttgtacaaggcatgcccaaagcaagactgt
aataagaaagttattgaagatgcggatcactacagatgcgaaaaatgtaaccaaacatat
cccaactttaaacacagactgcttctaaagatcaatgtggcagactacacgggcgagcaa
tggctgacttgtttccaagatacagctgaacaattgctagggaaaacagcagatgaaatt
ggaacattaagagacacggacgagaaggcatttgaacaggtgttcagcaagaacgctttc
ataaaaaaattgtttcgagtcaaggctaaagttgacacgtataatgatgaaactcgcgtt
aattgttctgccgacagagtagcttctttagatttacgaaaagaagccaggcgtttggca
gaggaaatcgagaagttaatggtctcaaatggacaagtttag
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