Debaryomyces hansenii: DEHA2C12562g
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Entry
DEHA2C12562g CDS
T01026
Name
(RefSeq) DEHA2C12562p
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dha
Debaryomyces hansenii
Pathway
dha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DEHA2C12562g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dha03019
]
DEHA2C12562g
Enzymes [BR:
dha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
DEHA2C12562g
Messenger RNA biogenesis [BR:
dha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
DEHA2C12562g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
SRPRB
ATP_bind_1
AAA_16
Motif
Other DBs
NCBI-GeneID:
2900386
NCBI-ProteinID:
XP_458221
UniProt:
Q6BU98
LinkDB
All DBs
Position
C:1100857..1102350
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AA seq
497 aa
AA seq
DB search
MSAIPGFGGDLNSNIDEDSNLNKSSVVEINGQSEWRFEVPFRTIMKLKVVNGIGEIFGTE
LPLNVEISLTGVKYAIYAPLDEGCKVEYYCVSNKANSTSTNEDDEISEYISEETSMNHYM
NLHFALESYRQSISEHNFVNSSSQKTGPRVLVVGNRHSGKTSLVKTLASYGCKMDRSPIL
VNLNPRDGVFSVPGSLTATPISDAFDLESVNGWGGSTTSGSTFHNPKQPLVKNYGFTSHS
DNLDLYKYQISKLGVAVVSRMEEDIAVKNSGLLIDTPPLSIKDFTIIENIVSDFEVNIIV
VIGNERLLIDLKKKFKHKIASSQLDFVKVPKSGGVIEVDDAYIRKSQEESIKEYFNGTIR
SPLSPFKTELDAKDFVIYKCVDSSEANSNLSFLPSGDSFTPEASEMSDGDKKEEFSLDTY
YSQLQEPSSSNLDNSIVAITQLPQNNKSARDLMNTCVLGYAHVSKFDDTKSKMKVLLPFP
GALPRNILISTSVGYTE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctataccagggttcggtggcgatttgaatagtaatatagacgaagactctaat
ttaaataaatcgagtgtcgtggaaattaatgggcaatcggaatggagatttgaagttcca
tttagaacgattatgaagttgaaggtagtgaacggaataggggaaatatttggtacagaa
ttacctctaaatgtcgaaattctgcttactggagtcaagtatgcaatatatgccccatta
gatgaaggatgtaaggttgaatactactgtgtttctaataaagcgaattcgacatctaca
aatgaagacgacgaaataagtgagtatataagtgaagaaacttcaatgaatcattatatg
aatttgcattttgcattggaatcgtatcgtcaatctatatctgaacataactttgttaat
agttcgtctcaaaagacaggacctcgagtattggttgtgggtaatcgccattcgggtaag
acctctcttgtgaagacgcttgcatcatacggttgcaagatggataggagtccgatattg
gtgaatttgaatcctagagatggtgtattctcggtgccagggtcgttgacggctacaccc
atcagtgatgcatttgacttggaaagtgtaaatggttggggtggatcaacgacatctgga
tccacatttcataatccgaaacaaccattggtaaagaattacggatttactagccattcg
gacaacctagacttatataaatatcaaatatcgaaactcggagttgctgtagtgtctcgt
atggaagaggacatagcagtcaaaaatagtggattactcattgacacgcctccattatca
atcaaagatttcacgattattgaaaatattgtatctgatttcgaagttaatataattgtg
gttataggcaacgaaaggttattaattgatttgaagaagaaattcaagcataagatcgct
tcatcccaactagactttgtcaaagttcctaagagtggtggtgttatagaggtagatgat
gcatatataagaaaatcgcaagaggagagtatcaaagagtatttcaatggtaccatcaga
agtcctttatctcctttcaaaacggagcttgatgcgaaagatttcgtaatttacaagtgt
gttgatagtctggaagcgaattcaaacctttcattcctcccgtctggagattcatttacc
ccagaagcttcagaaatgtcagatggagataagaaggaggaattctccctcgatacctat
tactctcaattgcaagagcctagctcttcgaacttggataactcgattgttgctatcacc
cagttgcctcagaataataaactggctagggacttaatgaatacttgtgttttgggttat
gctcatgtttctaaatttgacgatactaagagtaagatgaaagtcttattaccatttcct
ggtgcattaccaagaaatattttaatttctacaagcgtaggatatactgaatag
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