Debaryomyces hansenii: DEHA2F03058g
Help
Entry
DEHA2F03058g CDS
T01026
Name
(RefSeq) DEHA2F03058p
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
dha
Debaryomyces hansenii
Pathway
dha03040
Spliceosome
dha04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DEHA2F03058g
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DEHA2F03058g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dha03041
]
DEHA2F03058g
04121 Ubiquitin system [BR:
dha04121
]
DEHA2F03058g
03400 DNA repair and recombination proteins [BR:
dha03400
]
DEHA2F03058g
Enzymes [BR:
dha01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DEHA2F03058g
Spliceosome [BR:
dha03041
]
Complex B
Other components
Prp19 complex
DEHA2F03058g
Complex C
Prp19-CDC5 complex
DEHA2F03058g
Ubiquitin system [BR:
dha04121
]
Ubiquitin ligases (E3)
U-box type E3
DEHA2F03058g
DNA repair and recombination proteins [BR:
dha03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
DEHA2F03058g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp19
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR5
U-box
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_like
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Tricorn_2nd
WD40_MABP1-WDR62_2nd
Metal_resist
zf-Nse
Beta-prop_NWD2_C
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
2903900
NCBI-ProteinID:
XP_460499
UniProt:
Q6BMS2
LinkDB
All DBs
Position
F:complement(join(269170..270683,270749..270761))
Genome browser
AA seq
508 aa
AA seq
DB search
MICSISGETPKEPVISPKSGSIFERRLIENYISTSGKDPVNDEDLTIEELVGINSVTSTI
APPKPPSFNSIPSLLSTFQNEWDSLALEVFALRKQLHKAREELSAALYHHDAAVRVAAKA
IKERDEARSALQQLAVSIGKDEPMDDVVIESTSNGDAKASTQLPVEIINQARDELFQLHK
SQKPTLPITPEQNITVEFIANHAQPFKKAENSFVNATNKILLVGSSTGSVAVYNFNNPGK
NNVTKITHKGLVTAVNQVIHKDEQVPILAYKEKVFVRDSKTLFEHNHEGEIFQIVSHPTL
TNLFILFSRDGTWSLNDLDEMAVLFRSSKVNNICCGDIHVDGALLGTGTENGEVTIYNLT
SGQSVFNIKSKYPNIKKLSFASNGYWLLVSSANGENASCLDIIDLRKNAIIHSIEFSNEL
VDFAIDPSSSIIITYDSRNMLSLHRYIKKGKKWLDNLSEKTIEESNSALLSLDILNTADD
EEFKNTGEIKFAGVTQNSSILEFQLAYA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatttgttcaatttctggcgaaacgccgaaggagccagttatttcaccaaagagtgga
tcgatctttgagagaagacttatcgagaattatatatcgactagtggtaaagatccagtt
aatgatgaggatttaacaatagaagagttggtaggtatcaatagcgtaacatcgacgatt
gcaccaccaaaaccacctagtttcaattcaataccttcgttattatcgacctttcagaat
gaatgggattccttagcattggaagtatttgcattgagaaaacagttacataaagccaga
gaggagttgagtgcagctttataccaccacgacgcagcagtaagagtcgcagcaaaggct
atcaaagaaagagacgaagctagactggcattacaacagttagcagtatctattggaaaa
gacgaaccaatggatgatgtggttatagaatcaacttcaaatggagatgctaaagcttca
actcaattaccagttgaaataattaatcaagcccgtgacgagttgttccaattacataaa
tcccagaagcctactttacctattactcctgagcaaaatataaccgtagagttcattgca
aatcacgcacagcctttcaagaaggcagaaaattcattcgtgaatgcaaccaataaaatt
cttttagtgggatcgtccacagggtctgttgctgtttacaattttaataatcctggaaag
aacaatgtgactaaaatcacacataagggattagtaacggctgtgaatcaagtcatacat
aaagacgaacaagtgcctatacttgcgtataaggaaaaggtgtttgttagagacagcaaa
actttatttgaacataatcatgagggtgaaatctttcaaatagtgtctcatcccacatta
actaaccttttcattttattctcgcgtgatggaacttggtctttgaatgaccttgacgaa
atggccgttttattccgctcctcgaaagtaaataatatatgttgtggtgatatccacgta
gatggtgctctattaggtacaggcactgaaaatggagaggtaacaatttataatttgaca
tcaggacaatctgtatttaatattaaatccaaatatccaaatattaaaaaactttcattt
gcatcgaatggatattggttattagtttcatctgccaatggtgagaatgcaagttgtttg
gacataattgatttgcgaaagaatgccattattcattcgatagaattttcgaacgaattg
gtagattttgcaattgatccatcttcgtcgataatcattacatatgattcgaggaatatg
ctaagcttacatagatatattaagaaaggtaagaaatggctcgataatttgagtgaaaaa
actattgaagagtcgaactctgcgttgttaagcttggatattttaaacactgctgatgat
gaagaatttaagaacactggagagataaaatttgcaggtgttactcaaaattcttctata
ttagaatttcaactagcctatgcatga
DBGET
integrated database retrieval system
