Desulfitobacterium hafniense DCB-2: Dhaf_3907
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Entry
Dhaf_3907 CDS
T00822
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd00300
Lysine biosynthesis
dhd00470
D-Amino acid metabolism
dhd01100
Metabolic pathways
dhd01110
Biosynthesis of secondary metabolites
dhd01120
Microbial metabolism in diverse environments
dhd01230
Biosynthesis of amino acids
Module
dhd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dhaf_3907
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dhaf_3907
Enzymes [BR:
dhd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Dhaf_3907
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ACL21922
UniProt:
B8FSD4
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All DBs
Position
complement(4144007..4144858)
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AA seq
283 aa
AA seq
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MEIVKMHGLGNDFVFIDHFQGAPAELPDYPELARKLCHRQFGVGGDGLIMVLPSDKADAR
MRILNSDGSEPEMCGNGIRCFARYIYDQGYVSQNPLQVETLAGILTLQLSITGDQVTGVR
VDMGEPILKSEQVPVLIQGDPVVGARLDVDGQEFEFTAVSMGNPHCVLFVEDYETLDFER
IGPAIEKHPLFPRKTNVEFIIVNSPRELTMKVWERGAGPTLACGTGACASVVAAVLNGRT
ERKVTVHLPGGDLLIEWGEDNRVYMTGPAAYVFKGVLLEDALS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgtcaaaatgcacggcctgggcaatgattttgtctttatcgatcactttcag
ggcgccccggcagagctccccgattatccggagttggcccgtaagctttgccaccgccag
ttcggagtggggggagacgggctgattatggttctgccctcggataaagcggacgccagg
atgcgcatcctgaattcggatggctcagagccggagatgtgcggcaatggcattcgttgt
tttgcccgctatatctatgatcagggctatgtttcccaaaaccccctccaggtggagacc
ttggccgggattcttaccctgcagctcagcatcaccggagatcaagtcaccggggtgcgg
gtggatatgggggagccgatcctcaagtcggaacaggttccagtacttattcagggcgat
cctgtagtgggagccaggcttgatgtggatgggcaggaattcgaatttacggcagtgtcc
atgggcaaccctcactgcgtgctctttgtggaagattacgaaacccttgattttgagcgg
atcggcccggccattgaaaaacatccactctttccccgcaaaaccaatgtggagtttatc
atcgtcaacagcccccgggaactgaccatgaaggtatgggagcggggagcgggtcccacc
ctggcctgcggaacaggggcctgcgcttctgtagtggccgccgtccttaacggcaggacg
gagcgtaaggtcaccgttcatttgccgggaggcgatctcctgattgaatggggagaggat
aaccgggtgtacatgaccggaccggcggcctatgtatttaaaggggttttgctggaggat
gccctcagctaa
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