Dermatobacter hominis: LH044_11080
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Entry
LH044_11080 CDS
T09351
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dhi
Dermatobacter hominis
Pathway
dhi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LH044_11080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhi03021
]
LH044_11080
03400 DNA repair and recombination proteins [BR:
dhi03400
]
LH044_11080
Enzymes [BR:
dhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LH044_11080
Transcription machinery [BR:
dhi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LH044_11080
DNA repair and recombination proteins [BR:
dhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LH044_11080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
UDY33893
LinkDB
All DBs
Position
complement(2366937..2370539)
Genome browser
AA seq
1200 aa
AA seq
DB search
MSSRVNFRDRYSFANLEEVLDLPDLIAIQRESFRWFVEQGLADAFRDISPIKDFTETLSL
ELEFDPFDEDLRPPPKFTVEECKEKDMTFSAPIFARARFMNANTGEIKEQTVFMGDFPMM
TDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTIHPYRGEWIEFDV
EQKPGKDPTAGTRVARKRRLSLFVLLRALGYDEENAPGFLEAFVRHFDFLEGQWEKDREL
APTQEEAIIEIYKRARPGEPATVDSARNYFNNAFFEPRRYDLSRVGRYKLNRKLGPEIER
LQEQFPQLAGLLDVPDPDQPVLSRCEVLAATTYLLNLAAGTHGYRLDDQDHFANRRIRSV
GELIQNQVRIGLSRMERVVRERMTTQDVEAITPTTLINIRPVVAAIKEFFGTSQLSQFMD
QVNPLSGLNHRRRLSALGPGGLSRERAGFEVRDVHFSHYGRMCPIETPEGPNIGLQGALA
TFARVNQFGFIETPYRKVENGKVTDEIVFLPADEEEEYIVAQANTPIGPDGKFTADRVLV
RRSPQAASLSDLKLQLERDEFLGATTEISAVAPEEVQLMDVSPRQIVSVGTALIPFLEHD
DANRALMGANMQKQAVPLLRAEAPYIGTGMEVRAARDAADMILAAEDGTVIDVDGSQIVV
DYKKAGRVTYRLHKFERSNQDTCINQRPAVAEGQKVSAGDVLAEGPSTDNGELALGKNLL
VAFMPWEGYNFEDAIILSERLVKDDVLTSIHIHEHEVDARDTKLGPEEITRDIPNLSEEI
LMDLDERGIIRVGAEVDPGDVLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVP
HGESGKVIDVKVFSRDDEHELPPGVNQLVRVYVAQKRKISVGDKLAGRHGNKGVISRILP
IEDMPFLEDGTPVDIILNPLGVPSRMNVGQVLETHLGWAARWGWDDGDKHVGEAPIRGTE
TKTRPTTRPATLVATPVFDGAKWDETEMAGQHPTIKTIFSNVEPESVRPDYGDGGRLIGT
DGKATLYNGRTGERYDNPVTVGYAYILKLAHLVDDKIHARSTGPYSMITQQPLGGKAQFG
GQRFGEMEVWALEAYGAAYCLQELLTIKSDDTLGRVKVYEAIVKGENIPEPGIPESFKVL
IKEMQALCLNVEVLSRTGEEIKMRELDEDFFRAAEELGIDLSRPERGSDEDDARRQAERR
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctctcgcgtcaacttccgcgaccgctattcgttcgcgaacctcgaagaggtcctc
gacctcccggacctgatcgccatccagcgggagtccttccgctggttcgtcgagcagggc
ctggccgatgcgttccgcgacatctcgccgatcaaggacttcaccgagaccctcagcctc
gagctggagttcgatccgttcgacgaggacctgcgccctccgcccaagttcacggtggag
gagtgcaaggagaaggacatgaccttctccgcgccgatcttcgcccgcgcccgcttcatg
aacgccaacaccggcgagatcaaggagcagacggtcttcatgggggacttcccgatgatg
accgacaagggcacgttcatcatcaacggcaccgagcgcgtcgtggtgagccagctcgtc
cggtccccgggcgtcatcttccagccgggtgagcggttccgcctgcggaacctgtccaag
caccagctggtcaccggcacgatccacccctaccgcggcgagtggatcgagttcgacgtc
gagcagaagcccggcaaggacccgacggccggcacccgcgtcgcccgcaagcgccgcctc
tcgctgttcgtgctgctgcgcgccctcggctacgacgaggagaacgcccccgggttcctc
gaggccttcgtgcgccacttcgacttcctcgagggccagtgggagaaggaccgcgagctc
gcccccacccaggaggaggcgatcatcgagatctacaagcgggcccgcccgggtgagccc
gccaccgtggactcggcgcgcaactacttcaacaacgccttcttcgagccgcgccgctac
gacctgagccgcgtcgggcgctacaagctgaaccgcaagctcggcccggagatcgagcgc
ctgcaggagcagttcccgcagctcgccggcctcctcgacgtgcccgatcccgaccagccg
gtgctgagccgctgcgaggtcctcgccgcgacgacgtacctgctcaacctggccgccggc
acccacggctaccgcctggacgaccaggaccacttcgccaaccggcgcatccgctcggtc
ggcgagctcatccagaaccaggtccgcatcggcctgtcccgcatggagcgggtcgtgcgc
gagcgcatgaccacccaggacgtcgaggcgatcaccccgaccacgctgatcaacatccgc
ccggtggtcgcggccatcaaggagttcttcgggacctcccagctgtcgcagttcatggac
caggtcaacccgctgtcgggcctgaaccaccgccgtcgcctctcggcgctcggccccggt
ggcctcagccgtgagcgggcgggcttcgaggtccgcgacgtgcacttcagccactacggc
cgcatgtgcccgatcgagacgcccgagggtccgaacatcggcctccagggcgcgctggcg
accttcgcccgcgtcaaccagttcggcttcatcgagacgccgtaccggaaggtcgagaac
ggcaaggtcaccgacgagatcgtgttcctccccgccgacgaggaggaggagtacatcgtc
gcccaggcgaacacgccgatcggtcccgacggcaagttcaccgccgaccgcgtgctcgtg
cggcgctcgccgcaggccgcctcgctgtcggacctgaagctccagctcgagcgcgacgag
ttcctcggcgccaccacggagatctccgcggtggcccccgaggaggtccagctcatggac
gtgtcgccgcgccagatcgtgtcggtcggcaccgcgctgatcccgttcctcgagcacgac
gacgcgaaccgggcgctcatgggcgccaacatgcagaagcaggccgtgccgctgctgcgg
gccgaggcgccctacatcggcaccggcatggaggtgcgcgccgcccgcgacgccgccgac
atgatcctggccgccgaggacggcacggtcatcgacgtcgacggcagccagatcgtcgtc
gactacaagaaggccggccgggtcacctaccgcctgcacaagttcgagcgctcgaaccag
gacacctgcatcaaccagcggcccgccgtggccgagggccagaaggtgtccgccggcgac
gtgctggccgagggcccctcgaccgacaacggcgagctggcgctgggcaagaacctgctc
gtcgccttcatgccgtgggagggctacaacttcgaggacgccatcatcctctcggagcgc
ctggtcaaggacgacgtcctgacgtcgatccacatccacgagcacgaggtcgacgcccgc
gacacgaagctgggccccgaggagatcacccgggacatcccgaacctctccgaggagatc
ctgatggacctcgacgagcgcggcatcatccgcgtcggcgccgaggtcgacccgggcgac
gtgctcgtcggcaaggtcacccccaagggcgagaccgagctcacgcccgaggagcggctg
ctccgagcgatcttcggcgagaaggcccgcgaggtgcgcgacacctcgctgaaggtgccc
cacggcgagtccggcaaggtcatcgacgtcaaggtgttcagccgcgacgacgagcacgag
ctgcccccgggcgtgaaccagctggtccgcgtctacgtcgcccagaagcgcaagatctcc
gtcggggacaagctcgccggccgccacggcaacaagggcgtgatctcccgcatcctgccg
atcgaggacatgccgttcctcgaggacggcaccccggtcgacatcatcctgaacccgctc
ggcgtcccctcccgcatgaacgtgggccaggtgctcgagacgcacctgggctgggccgcc
cgctggggctgggacgacggtgacaagcacgtgggcgaggcgcccatccgcggcaccgag
accaagacgcgtccgaccacccgtcccgccacgctcgtcgccaccccggtgttcgacggc
gccaagtgggacgagaccgagatggcgggccagcacccgacgatcaagacgatcttctcg
aacgtcgagcccgagtcggtccgccccgactacggcgacggcggccggctcatcggcacc
gacggcaaggccacgctctacaacggccgcaccggcgagcgctacgacaacccggtgacc
gtgggctacgcctacatcctgaagctcgcccacctcgtggacgacaagatccacgcccgc
tcgacgggtccgtactccatgatcacccagcagccgctcggcggtaaggcccagttcggt
ggccagcgcttcggtgagatggaggtgtgggcgctcgaggcctacggcgcggcgtactgc
ctccaggagctgctgaccatcaagtccgacgacaccctcggccgcgtcaaggtctacgag
gcgatcgtcaagggcgagaacatccccgagcccggcatccccgagagcttcaaggtgctc
atcaaggagatgcaggcgctctgcctgaacgtcgaggtcctctcccgcacgggcgaggag
atcaagatgcgtgagctcgacgaggacttcttccgtgctgccgaggagctgggcatcgac
ctgtcccggcccgagcgcggatccgacgaggacgacgcccgccgccaggcggagcgtcgc
tga
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