Delftia sp. HK171: BO996_22985
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Entry
BO996_22985 CDS
T04584
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dhk
Delftia sp. HK171
Pathway
dhk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BO996_22985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhk03400
]
BO996_22985
Enzymes [BR:
dhk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BO996_22985
DNA repair and recombination proteins [BR:
dhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BO996_22985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
APE50479
LinkDB
All DBs
Position
5223093..5223869
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AA seq
258 aa
AA seq
DB search
MKIATWNVNSLSVRLPQVLAWLQANPVDALALQELKLTDDKFPLQALQEAGYHAVSHGQK
TYNGVAWLTRTPVRDVVRNIPGLDDEQARIIAATLDAEGGPVRLINGYFVNGQAPGTDKF
AYKMRWLQALQDWVKSEMATHPRLVLVGDFNVAPEDRDSYDPIGLKDTIHHTMEERTHFQ
ALLQLGLTDAFRMFDQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALRPSVSACSVDRA
PRKNPQPSDHAPVVVTLG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccacttggaacgtcaattccctgtccgtgcgcctgccacaggtgctggcc
tggctgcaggccaaccctgtcgatgcgctggctctgcaggaactcaagctcaccgacgac
aagtttccgctgcaggcgctgcaggaggccggctaccacgcggtcagccatggacagaag
acctacaacggcgtggcctggctgacgcgcacgccggtgcgcgacgtggtgcgcaatatt
ccgggcctggatgacgagcaggcccgcatcattgccgccaccctcgatgccgaaggcggc
ccggtgcgcctgatcaatggctacttcgtcaatgggcaggcgccgggcaccgacaagttc
gcctacaagatgcgctggctgcaggcgctgcaggactgggtgaaaagcgaaatggcgacc
cacccgcgcttggtgctcgtgggcgacttcaacgtggcgcccgaggaccgcgactcctac
gatcccatcggcctgaaggacacgatccaccacacgatggaagagcgcacgcatttccag
gcgctgctgcagctgggcctgaccgatgccttccgcatgttcgaccagcccgagaaaagc
tattcgtggtgggactaccggatgttgggtttccagaagaaccggggcctgcgcatcgac
catatcctggtcagcgaggcattgcgccccagcgtcagcgcctgcagcgtggaccgcgcg
ccgcgcaagaacccgcagcccagtgaccacgcacccgtggtcgtgaccttgggctga
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