Dickeya poaceiphila: Dpoa569_0000386
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Entry
Dpoa569_0000386 CDS
T06188
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dic
Dickeya poaceiphila
Pathway
dic00040
Pentose and glucuronate interconversions
dic01100
Metabolic pathways
dic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dpoa569_0000386
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dpoa569_0000386
Enzymes [BR:
dic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dpoa569_0000386
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QDX28715
UniProt:
A0A5B8HEQ6
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Position
complement(441758..442885)
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AA seq
375 aa
AA seq
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MKSFITPIAAGLLLAFCQSSLAADTGGYTKTDGGDVTGAVKKTATSMQDIIDIVEAAKVD
AKGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDARGVEIKDFTKGLTIIGANGS
SANFGIWIVNSSDVVVRNMRIGYLPGGAQDGDMFRIDNSPNVWLDHNELFAANHECDGTK
DGDTTFESAFDIKKGATYVTISYNYIHGVKKVGLAGFSSSDSAERNITYHHNIYNDVNAR
LPLQRGGNVHAYNNLYTNVTSSGLNVRQNGKALIENNWFENAVSPVTSRYDGSNFGTWVL
KNNNITKPADFATYNITWTADTKEYRNADSWTSTGTYPTVPYSYSPVSAQCVKDKLASYA
GVGKNLATLTSAACK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattcattactccgattgccgccggtctgctgctggccttctgtcaatccagt
ctggctgccgataccggtggttataccaaaactgacggtggtgatgtcacgggcgccgta
aagaaaacggccacctcgatgcaggatattattgatatcgttgaagcagccaaagttgac
gccaaaggcaagaaagttaaaggtggggcctatccgctggtgattacctacaccggtaac
gaagacagcctgatcaatgcagctgccgccaacatctgcggtcagtggagcaaagacgcc
cgcggtgtggaaatcaaagacttcaccaaagggttaaccattatcggcgccaatggttct
tccgctaacttcggtatctggattgtgaactcttccgacgtcgtggtgcgcaacatgcgt
atcggctatctgccgggcggtgctcaggatggcgacatgttccgtatcgacaactcgccg
aacgtctggctggaccataacgaactgtttgccgccaaccacgagtgcgacggcaccaaa
gacggcgacaccaccttcgaatccgcctttgacatcaagaaaggtgcgacttacgtcacc
atctcctacaactacatccacggcgtgaaaaaagtgggtttggctggttttagctcttct
gacagcgctgaacgcaacatcacttaccaccacaacatttacaacgacgtcaacgcccgt
ctgccgttgcaacgcggtggtaacgtccacgcgtataacaacctgtacaccaacgtgacc
agttccggtctgaatgtacgtcagaatggtaaagcgctgatcgaaaacaactggttcgaa
aatgcggtaagcccggtgacgtcccgttatgacggcagtaacttcggcacctgggtgctg
aagaacaacaacatcaccaaacccgctgatttcgctacctacaacatcacctggacggca
gataccaaagagtatcggaacgccgacagctggacctcgaccggcacctacccgactgtg
ccttacagctatagcccggttagcgcacaatgcgtgaaggacaaactggccagctatgct
ggtgtaggcaaaaatctggcaacgctgaccagcgcagcctgtaagtaa
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