Dickeya poaceiphila: Dpoa569_001503
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Entry
Dpoa569_001503 CDS
T06188
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dic
Dickeya poaceiphila
Pathway
dic03030
DNA replication
dic03430
Mismatch repair
dic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dpoa569_001503 (holB)
03430 Mismatch repair
Dpoa569_001503 (holB)
03440 Homologous recombination
Dpoa569_001503 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dic03032
]
Dpoa569_001503 (holB)
03400 DNA repair and recombination proteins [BR:
dic03400
]
Dpoa569_001503 (holB)
Enzymes [BR:
dic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dpoa569_001503 (holB)
DNA replication proteins [BR:
dic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dpoa569_001503 (holB)
DNA repair and recombination proteins [BR:
dic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dpoa569_001503 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
DUF6587
Motif
Other DBs
NCBI-ProteinID:
QDX29716
UniProt:
A0A5B8HKI7
LinkDB
All DBs
Position
1636561..1637571
Genome browser
AA seq
336 aa
AA seq
DB search
MEWYPWLNAPYRQLLASHQVKRGHHALLLHAIDGMGDASLMYAFSRWLLCQQPEGAKSCG
RCHSCELMNAGTHPDCHTLSPEKGKLSLGVDAVRAALEQVYQRSRQGGAKVVWLPLAENL
TEAAANALLKTLEEPPAQTYFLLGCREPGQLLATLRSRCLHLYLDVPTEQQGIQWLRARG
HNDETAVQSALRLAAGAPLAADALLQPDSWKARQMVCQQLSHSLQSGDALALLSVLNHDD
ADRRIHWVCALFLDALKWRHQAAGQRTNQDQASLVAQLASQLGDARLHHSLRRWLYCRYQ
LLSVTGVNRELLLTELLLAWENLLSSPTLPVPSFFS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagtggtatccctggctgaatgccccttatcgccagttgctggcgtcgcatcaggtg
aagcgcggtcatcacgcgttgttgctacatgccattgatggcatgggcgatgcgtcgctg
atgtacgcatttagccgttggttgctgtgccagcagccggaaggggcaaagagttgtgga
cgctgccattcctgcgaattgatgaatgcgggtacccacccagattgtcataccctcagt
cctgaaaaaggcaaactcagtctgggcgttgatgcggtgcgtgctgcgctggagcaggtg
taccagcgttcacgacagggtggggcaaaggtggtctggctgccgctggcggaaaatctc
accgaagccgcggctaacgcgttgctgaaaacgttggaggagccgccggcgcaaacctat
ttcctattgggatgccgcgagccaggtcagttgctggcaacgttgcgcagtcgctgcctg
catttgtatttggatgtgccgactgagcagcaaggcatacagtggctacgtgcacgcggt
cataatgatgagacggcggttcagagtgcgttgcggctggctgcgggtgcaccattggcg
gctgacgccttgttgcaacctgatagctggaaggcgcgccagatggtctgtcagcagtta
agtcacagcttgcaatctggtgatgcattggcgctgttatccgtgctgaatcatgatgat
gccgaccgccgtatccattgggtatgcgccttgtttctggatgcgctgaaatggcgtcat
caagccgctggtcagcgcactaaccaggatcaggcatcgctggtggcgcaactggcatca
caacttggcgatgcccgattgcatcatagcctgcggcgttggctgtactgtcgttaccaa
ctgttgtcggtgacgggcgttaaccgcgaattgttattaacggaactactgctggcgtgg
gagaacctgttgtcatctccgacgctaccggtgccgtcatttttttcctga
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