Diaphorobacter sp. HDW4A: G7047_26970
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Entry
G7047_26970 CDS
T06499
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dih
Diaphorobacter sp. HDW4A
Pathway
dih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G7047_26970 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dih03021
]
G7047_26970 (rpoC)
03400 DNA repair and recombination proteins [BR:
dih03400
]
G7047_26970 (rpoC)
Enzymes [BR:
dih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G7047_26970 (rpoC)
Transcription machinery [BR:
dih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G7047_26970 (rpoC)
DNA repair and recombination proteins [BR:
dih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G7047_26970 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QIL83174
UniProt:
A0A6G8CWH1
LinkDB
All DBs
Position
5920358..5924593
Genome browser
AA seq
1411 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFGIMSEDDYDAKRKEYGDEFIAKM
GAEGIKDLLEGIDIDMEIERLRGDLTGSEVKVKKNAKRLKVLEAFKKSGIKPEWMVLEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPYLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPIM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYHATRDKINGKGEGLVFSDIGEVQRALDAGEA
ELAARINVRLTEWTKNKATGEFEPETKLVETTVGRALLSEILPKGLPFSNMNKALKKKEI
SKLINVSFRKCGLKETVVFADKLLQNGFRLATRAGISICVDDMLVPPQKPEIIGRAEKEV
KEIEQQYVSGLVTAGERYNKVVDIWGKAGDEISKVMMQQLSKQKTIDRHGNEVDQESFNS
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVNEIDCGTHNGSVMRAIVEGGETIESLRDRILG
RVAAEDIIHPETRVVLVPAGTLLDEDTIEEIEAQGVDEVKVRTALTCETRYGLCAKCYGR
DLGRGGMINFGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGSISFN
STMRYVTNTKGELVVISRSGEIVISDNGRERERHKVPYGAILAIKADQQIKAGAILANWD
PLTRPIITEYAGRVKFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGSAKVVRPQVKLID
ANGQEVKIPGTDHSVTIGFQVGALIQVRDDQDVGPGEVLARIPVEGQKTRDITGGLPRVA
ELFEARSPKDKGMLAEMTGTISFGKETKGKVRLQITDPEGKVWDELVPKEKNVLVHEGQV
VNKGELVVDGPADPQDILRLLGIEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRR
VVVENTGESTYIAGEQVERSEILNKNEALQKEGKIPATYSNILLGITKASLSTDSFISAA
SFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKAKDTMDEAERRAI
ADAEAAEFATAGDADDAVEPAAQDQSAGTAD
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgttactcgacctgttcaagcaattcacgcccgatgagcatttcgatgccatc
aaaatcggcatggcttcgcccgaaaagatccgctcgtggtctttcggcgaggtgaagaaa
cctgagacgatcaactaccgcacgttcaagccagagcgtgacggtctgttctgcgcaaag
atcttcggtcccatcaaggactacgaatgcctttgcggcaagtacaagcgcctgaagcac
cgcggtgtgatctgcgagaagtgcggcgttgaagtcacgcagaccaaggttcgccgcgaa
cgcatgggtcacatcgacctggccgctccttgcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcctggtgctcgacatgacgctgcgcgacatcgaacgcgtgctgtat
ttcgaagcatatgtggtcaccgacccaggcatgactccgctgaagaagttcggcatcatg
tccgaggacgactatgacgccaagcgcaaggaatacggtgatgaattcatcgccaagatg
ggcgctgagggcatcaaggatctgctcgaaggcatcgacatcgatatggaaatcgagcgt
ctgcgtggtgatctgaccggctccgaagtcaaggtcaagaagaatgccaagcgcctgaag
gttctggaagcgttcaagaagtccggcatcaagcccgagtggatggtgctcgaagtgctg
cccgtgctgcctccggacctgcgtccgctggtgccgctggatggtggccgtttcgcgacc
tccgatctgaacgatctgtatcgccgcgtcatcaaccgcaactcgcgtctgcgtcgcctg
ctggagttgaaggctcctgaaatcatcgcgcgcaacgaaaagcgcatgctgcaggaagcg
gttgactcgctgctggacaacggccgtcgcggcaaggcgatgacgggtgcgaacaagcgt
gccctcaagtcgctggccgacatgatcaagggtaagagcggtcgtttccgccagaacttg
ctgggcaagcgcgtcgactactcgggtcgttcggtcattaccgtgggcccgtacctcaag
ctgcaccagtgcggcctgccaaagctcatggctctggaactgttcaagccattcatcttc
tcgcgcctcgaagcgatgggcatcgccacgaccatcaaggcggccaagaaggaagtggaa
gccggcacgcccgtcgtgtgggacatcctggaagaggtcatcaaggaacacccgatcatg
ctgaaccgtgcgcctacgctgcaccgtttgggcattcaggcgttcgagccgatcctgatt
gaaggcaaggcgatccaactgcacccactcgtttgcgcggccttcaacgccgacttcgac
ggtgaccagatggccgttcacgttccgctgtcggtggaagcacagctcgaagcccgcaca
ctgatgctggcgtcgaacaacgtgctgttcccggcctcgggcgaaccttccatcgttcct
tctcaggacgtggtgctgggtctttatcacgccacccgtgacaagatcaacggcaagggt
gaaggcttggtgttctccgacatcggtgaagtgcaacgcgcgttggacgcaggtgaagcc
gagctcgcagcgcgcatcaacgtgcgcctgacggagtggaccaagaacaaggccacgggg
gaattcgagcccgagaccaagctcgtggaaaccaccgtcggccgtgctctgctgtccgaa
attcttcccaagggcctgccgttctcgaacatgaacaaggcgctcaagaagaaggaaatc
tccaagctcatcaacgtgagcttccgcaagtgcggtctgaaggaaacggtcgttttcgca
gacaagctgctgcaaaacggtttccgtctggctacgcgtgctggtatttccatctgcgtg
gacgacatgctggtgccaccgcaaaagcccgaaatcattggccgtgccgaaaaggaagtc
aaagagatcgagcagcagtacgtctccggtctggtgacggctggcgagcgctacaacaag
gtcgtggatatctggggcaaggccggggacgaaatctccaaggtcatgatgcaacagctg
tccaagcaaaagaccattgaccgtcacggcaacgaagtcgatcaggaatcgttcaattcg
atttacatgatggccgactccggcgcccgcggttccgcagctcagattcgtcagctcgca
ggtatgcgtggtctgatggcaaagcctgacggctccatcatcgagacgcctatcaccgcg
aacttccgcgaaggcctgaacgtgttgcagtacttcatctccacccacggtgctcgtaag
ggcctggcggatacggcgttgaagacggcgaactcgggttacctgacacgtcgtctggtg
gacgtgacgcaggatctggtggtcaacgagatcgattgcggaacgcacaacggttcggtg
atgcgcgccatcgtcgaaggtggtgaaaccatcgagtcgctgcgtgaccgtatcctcggc
cgcgtggctgccgaagacatcatccaccccgaaacccgcgtggtgctggttccggctggc
acactgctggacgaagacacgatcgaagagatcgaagcccagggcgtggacgaagtgaag
gtgcgtacagccctgacctgcgaaacccgctacggcctgtgcgccaagtgctacggtcgc
gacttgggccgcggcggcatgatcaacttcggcgaagccgtgggtgtgatcgctgcccag
tccatcggtgaaccgggtacccagctgaccatgcgtacgttccacattggtggtgcggct
tcgcgtgcagcgattgcttcgagcgtggaggccaagtcgaacggttcgatcagcttcaac
agcacgatgcgctatgtcaccaacaccaagggtgaactggtggtgatttcccgttccggc
gaaatcgtcatcagcgacaacggccgtgagcgtgaacgtcacaaggtgccgtacggcgcc
attctggcgatcaaggctgatcagcagatcaaggctggcgcgattctcgccaactgggat
ccactgactcgcccgatcatcaccgagtacgctggtcgcgtgaagttcgaaaacgtcgag
gaaggcctcaccgttgcgaagcaggtcgacgaagtgaccggtctgtccacactggtggtg
atcgatcccaagcgtcgtggctctgccaaggtggtgcgtccccaggtcaagttgatcgac
gcgaacggccaggaagtgaagatcccaggcactgatcactcggtgacgatcggcttccag
gtcggcgctctgattcaggtgcgcgacgatcaggacgtgggcccaggcgaagtgctggcc
cgtatcccggtcgaaggtcagaagacccgcgacattaccggtggtctgccacgtgtggcc
gagctgttcgaagcgcgttcgccaaaggacaagggcatgctggccgaaatgaccggcacg
atctcgttcggcaaggaaaccaaaggcaaggttcgcctgcagatcactgacccagagggc
aaggtctgggacgaactggttccgaaggaaaagaacgttctggtgcacgaaggtcaggtc
gtcaacaagggcgaactggttgtcgacggacccgcagatccgcaggacatcctgcgtctc
ctgggtatcgaagagctggcacgctacatcgtcgatgaagttcaggacgtgtaccgcttg
cagggcgtgaagatcaatgacaagcacattgaagtgatcgttcgccagatgctgcgtcgc
gttgtggtcgagaacaccggcgagtccacctacattgcgggtgaacaagtcgagcgttcg
gaaatcctcaacaagaacgaagcgctgcagaaggagggcaagattccagctacatactcc
aacatcctgttgggtatcacgaaggcatcgctgtcgaccgactcgttcatctcggctgct
tccttccaggaaaccacccgcgtgctcaccgaagctgccatcatgggcaagcgcgacgag
ctgcgaggcctgaaggaaaacgtcatcgtgggtcgtttgatccccgctggtaccggtctg
gcttatcaccaggctcgcaaggccaaggacaccatggatgaagccgagcgccgcgcgatt
gcagatgcagaagctgctgaatttgcaaccgctggtgatgcggatgacgccgtggagcct
gctgctcaggaccaaagcgctggcactgcggactga
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integrated database retrieval system
